HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:142.7 nTPM
HPA Brain:120.2 nTPM
GTEx:142.7 nTPM
FANTOM5:194.6 Scaled Tags Per Million
Pig:304.2 nTPM
Mouse:425.6 nTPM
Allen mouse:13.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008352Antibody CAB001994
Glial cells LowLow
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 120.2
Sample id Sample description nTPM
Hippocampus
nTPM: 94.7
1898 Male, age 80, left hemisphere 118.9
1855 Male, age 76, left hemisphere 106.3
2621 Female, age 67, right hemisphere 103.2
1911 Female, age 85, right hemisphere 88.0
2529 Female, age 94, left hemisphere 78.0
2148 Female, age 91, left hemisphere 74.0
Dentate gyrus
nTPM: 94.0
2010 Male, age 76, both hemispheres 120.5
1927 Female, age 91, both hemispheres 114.9
2530 Female, age 94, left hemisphere 97.7
2246 Female, age 85, both hemispheres 86.0
2531 Female, age 67, both hemispheres 74.8
2528 Male, age 74, both hemispheres 70.0
Entorhinal gyrus
nTPM: 76.8
1938 Female, age 85, left hemisphere 97.7
1787 Male, age 76, left hemisphere 89.4
2764 Male, age 80, right hemisphere 73.3
2117 Female, age 91, right hemisphere 71.0
2613 Female, age 94, left hemisphere 65.4
2686 Male, age 75, right hemisphere 63.8
Hippocampus, CA1
nTPM: 120.2
2749 Male, age 80, left hemisphere 231.8
1873 Female, age 85, both hemispheres 102.5
2045 Male, age 76, both hemispheres 101.8
2527 Male, age 74, both hemispheres 97.7
2082 Female, age 91, right hemisphere 67.4
Hippocampus, CA2
nTPM: 100.8
1892 Male, age 76, both hemispheres 148.5
1963 Male, age 80, left hemisphere 116.1
2249 Male, age 74, both hemispheres 98.8
2437 Female, age 94, left hemisphere 85.4
1940 Female, age 85, left hemisphere 83.6
2113 Female, age 91, right hemisphere 72.1
Hippocampus, CA3
nTPM: 110.8
2137 Male, age 80, left hemisphere 197.2
1867 Male, age 76, both hemispheres 136.0
2436 Male, age 74, both hemispheres 100.3
1891 Female, age 85, both hemispheres 79.3
2620 Female, age 94, left hemisphere 78.1
2861 Female, age 67, both hemispheres 73.8
Parahippocampal cortex
nTPM: 80.3
2245 Female, age 91, both hemispheres 100.7
2018 Male, age 76, both hemispheres 95.7
2250 Female, age 67, right hemisphere 95.5
1850 Male, age 80, both hemispheres 86.2
1933 Female, age 85, both hemispheres 85.1
2532 Female, age 72, left hemisphere 77.5
1990 Female, age 91, right hemisphere 77.1
2693 Female, age 94, both hemispheres 70.8
2692 Male, age 74, both hemispheres 59.9
2622 Female, age 67, right hemisphere 55.0
Perirhinal gyrus
nTPM: 95.8
1847 Female, age 91, left hemisphere 116.9
2848 Male, age 76, right hemisphere 92.7
2521 Female, age 94, right hemisphere 92.6
1841 Female, age 85, right hemisphere 91.1
1794 Male, age 80, right hemisphere 85.8
Subiculum
nTPM: 90.0
2042 Male, age 76, both hemispheres 118.3
1901 Male, age 80, both hemispheres 115.8
1977 Female, age 85, both hemispheres 94.6
2438 Female, age 94, left hemisphere 82.8
2729 Female, age 91, right hemisphere 66.2
2619 Male, age 74, both hemispheres 62.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 142.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 142.7
Samples: 197

Max nTPM: 304.8
Min nTPM: 68.5
Std nTPM: 40.1
Median nTPM: 136.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 304.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 275.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 274.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 261.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 235.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 233.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 233.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 231.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 225.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 223.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 218.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 194.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 194.6
FF:10169-103B7 60 years, female 270.0
FF:10153-102I9 76 years, female 119.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 304.2
Pig sample Sample description nTPM
Subiculum
nTPM: 179.3
Samples: 4

Max nTPM: 232.2
Min nTPM: 159.0
Sample A Female 232.2
Sample B Female 161.1
Sample C Male 159.0
Sample D Male 165.0
Dorsal hippocampus
nTPM: 304.2
Samples: 4

Max nTPM: 408.4
Min nTPM: 235.0
Sample A Female 408.4
Sample B Female 315.1
Sample C Male 235.0
Sample D Male 258.1
Entorhinal cortex
nTPM: 168.1
Samples: 4

Max nTPM: 185.1
Min nTPM: 137.2
Sample A Female 185.1
Sample B Female 179.8
Sample C Male 170.2
Sample D Male 137.2
Ventral hippocampus
nTPM: 241.6
Samples: 4

Max nTPM: 359.0
Min nTPM: 164.3
Sample A Female 223.9
Sample B Female 164.3
Sample C Male 219.3
Sample D Male 359.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 425.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 261.3
Samples: 4

Max nTPM: 287.0
Min nTPM: 248.9
Sample A Male 248.9
Sample B Male 253.8
Sample C Female 287.0
Sample D Female 255.3
Hippocampal formation
nTPM: 425.6
Samples: 4

Max nTPM: 496.1
Min nTPM: 371.3
Sample A Male 398.0
Sample B Male 437.0
Sample C Female 496.1
Sample D Female 371.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.9
69526892 Antisense, RP_050421_01_H01, Mouse strain C57BL/6J (56 days, male) 13.9

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