HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:131.7 nTPM
HPA Brain:179.1 nTPM
GTEx:131.7 nTPM
FANTOM5:97.9 Scaled Tags Per Million
Pig:78.1 nTPM
Mouse:206.5 nTPM
Allen mouse:12.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001565Antibody HPA056092
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 179.1
Sample id Sample description nTPM
Hippocampus
nTPM: 55.5
1898 Male, age 80, left hemisphere 97.0
1911 Female, age 85, right hemisphere 63.7
2621 Female, age 67, right hemisphere 59.7
2529 Female, age 94, left hemisphere 48.0
1855 Male, age 76, left hemisphere 40.5
2148 Female, age 91, left hemisphere 24.1
Dentate gyrus
nTPM: 51.7
2246 Female, age 85, both hemispheres 67.0
2530 Female, age 94, left hemisphere 66.5
2010 Male, age 76, both hemispheres 53.4
1927 Female, age 91, both hemispheres 52.2
2528 Male, age 74, both hemispheres 40.8
2531 Female, age 67, both hemispheres 30.6
Entorhinal gyrus
nTPM: 112.7
1787 Male, age 76, left hemisphere 164.7
1938 Female, age 85, left hemisphere 136.3
2764 Male, age 80, right hemisphere 135.6
2613 Female, age 94, left hemisphere 120.2
2686 Male, age 75, right hemisphere 62.7
2117 Female, age 91, right hemisphere 57.0
Hippocampus, CA1
nTPM: 57.6
2749 Male, age 80, left hemisphere 113.0
2527 Male, age 74, both hemispheres 52.8
1873 Female, age 85, both hemispheres 46.6
2082 Female, age 91, right hemisphere 45.9
2045 Male, age 76, both hemispheres 29.9
Hippocampus, CA2
nTPM: 80.4
1892 Male, age 76, both hemispheres 136.8
1940 Female, age 85, left hemisphere 93.0
2437 Female, age 94, left hemisphere 76.0
1963 Male, age 80, left hemisphere 62.2
2249 Male, age 74, both hemispheres 58.4
2113 Female, age 91, right hemisphere 56.2
Hippocampus, CA3
nTPM: 72.5
1867 Male, age 76, both hemispheres 121.8
2137 Male, age 80, left hemisphere 111.1
1891 Female, age 85, both hemispheres 85.3
2436 Male, age 74, both hemispheres 57.1
2620 Female, age 94, left hemisphere 32.5
2861 Female, age 67, both hemispheres 27.3
Parahippocampal cortex
nTPM: 114.1
1850 Male, age 80, both hemispheres 178.6
1933 Female, age 85, both hemispheres 157.8
2250 Female, age 67, right hemisphere 134.6
1990 Female, age 91, right hemisphere 115.9
2532 Female, age 72, left hemisphere 113.3
2018 Male, age 76, both hemispheres 111.2
2693 Female, age 94, both hemispheres 108.1
2245 Female, age 91, both hemispheres 91.4
2622 Female, age 67, right hemisphere 76.1
2692 Male, age 74, both hemispheres 54.1
Perirhinal gyrus
nTPM: 179.1
1841 Female, age 85, right hemisphere 210.4
1794 Male, age 80, right hemisphere 193.9
2848 Male, age 76, right hemisphere 183.2
1847 Female, age 91, left hemisphere 167.3
2521 Female, age 94, right hemisphere 140.6
Subiculum
nTPM: 83.0
1977 Female, age 85, both hemispheres 135.9
1901 Male, age 80, both hemispheres 114.4
2438 Female, age 94, left hemisphere 81.4
2042 Male, age 76, both hemispheres 77.1
2619 Male, age 74, both hemispheres 60.2
2729 Female, age 91, right hemisphere 29.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.7
Samples: 197

Max nTPM: 886.8
Min nTPM: 24.7
Std nTPM: 91.8
Median nTPM: 106.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 886.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 442.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 422.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 383.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 351.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 324.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 302.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 300.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 292.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 282.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 278.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.9
FF:10169-103B7 60 years, female 110.0
FF:10153-102I9 76 years, female 85.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.1
Pig sample Sample description nTPM
Subiculum
nTPM: 78.1
Samples: 4

Max nTPM: 87.2
Min nTPM: 71.7
Sample A Female 71.7
Sample B Female 73.6
Sample C Male 87.2
Sample D Male 80.0
Dorsal hippocampus
nTPM: 61.3
Samples: 4

Max nTPM: 71.5
Min nTPM: 56.5
Sample A Female 56.5
Sample B Female 71.5
Sample C Male 60.7
Sample D Male 56.6
Entorhinal cortex
nTPM: 64.2
Samples: 4

Max nTPM: 77.3
Min nTPM: 53.3
Sample A Female 59.9
Sample B Female 53.3
Sample C Male 77.3
Sample D Male 66.3
Ventral hippocampus
nTPM: 69.0
Samples: 4

Max nTPM: 75.2
Min nTPM: 59.6
Sample A Female 75.2
Sample B Female 72.9
Sample C Male 59.6
Sample D Male 68.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 206.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 206.5
Samples: 4

Max nTPM: 228.5
Min nTPM: 193.5
Sample A Male 193.5
Sample B Male 228.5
Sample C Female 205.3
Sample D Female 198.7
Hippocampal formation
nTPM: 125.7
Samples: 4

Max nTPM: 172.0
Min nTPM: 94.2
Sample A Male 172.0
Sample B Male 115.0
Sample C Female 94.2
Sample D Female 121.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.3
69117449 Antisense, RP_050330_01_B08, Mouse strain C57BL/6J (56 days, male) 14.7
963 Antisense, RP_040324_01_A03, Mouse strain C57BL/6J (56 days, male) 9.9
964 Antisense, RP_040324_01_A03, Mouse strain C57BL/6J (56 days, male) 5.0

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