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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
176.1
nTPM
FANTOM5:
114.3
Scaled Tags Per Million
Pig:
93.0
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
176.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 86.2
2301
Female, age 85, both hemispheres
114.8
1984
Male, age 76, both hemispheres
107.2
2188
Female, age 91, both hemispheres
66.7
2090
Male, age 80, both hemispheres
56.0
Dorsal cochlear nucleus nTPM: 120.4
2370
Male, age 61, both hemispheres
165.5
2802
Male, age 74, right hemisphere
119.5
2058
Male, age 76, both hemispheres
113.4
2187
Female, age 91, both hemispheres
111.7
2378
Male, age 80, both hemispheres
91.7
Dorsal tegmental nucleus nTPM: 123.7
2083
Male, age 80, both hemispheres
158.1
2358
Male, age 61, both hemispheres
124.0
1936
Male, age 76, left hemisphere
115.8
2326
Male, age 74, both hemispheres
96.8
Dorsolateral tegmental area nTPM: 96.0
2654
Male, age 80, both hemispheres
155.4
2141
Male, age 76, both hemispheres
124.6
2751
Female, age 85, both hemispheres
81.5
2360
Male, age 74, both hemispheres
65.2
2337
Male, age 61, both hemispheres
53.5
Kolliker-Fuse nucleus nTPM: 130.9
2163
Male, age 80, both hemispheres
203.8
2793
Female, age 91, left hemisphere
130.4
2315
Male, age 76, right hemisphere
58.4
Lateral lemniscal nuclei nTPM: 154.6
2169
Male, age 76, both hemispheres
179.3
2453
Male, age 74, right hemisphere
179.2
2036
Male, age 80, both hemispheres
153.8
2320
Female, age 91, left hemisphere
150.4
2746
Female, age 85, left hemisphere
110.3
Lateral parabrachial nucleus nTPM: 104.4
2139
Female, age 85, right hemisphere
153.6
2790
Male, age 61, both hemispheres
143.8
2013
Male, age 80, both hemispheres
80.7
2792
Male, age 76, both hemispheres
39.5
Lateral vestibular nucleus nTPM: 176.1
2184
Male, age 76, both hemispheres
208.9
2311
Male, age 80, both hemispheres
143.3
Locus coeruleus nTPM: 160.1
2123
Female, age 91, both hemispheres
203.7
2720
Male, age 74, both hemispheres
199.2
2162
Male, age 80, both hemispheres
195.8
1980
Male, age 76, both hemispheres
161.9
2317
Female, age 72, unknown
138.3
2014
Male, age 55, unknown
125.1
2788
Male, age 74, unknown
96.8
Medial parabrachial nucleus nTPM: 137.0
2156
Male, age 61, both hemispheres
222.9
2786
Male, age 76, both hemispheres
157.7
2854
Male, age 80, both hemispheres
124.1
2170
Female, age 91, both hemispheres
108.5
2463
Female, age 85, right hemisphere
71.9
Medial periolivary nuclei nTPM: 129.1
2171
Female, age 85, both hemispheres
191.6
2063
Male, age 76, both hemispheres
154.1
2458
Female, age 91, both hemispheres
135.3
2791
Male, age 74, right hemisphere
97.5
2081
Male, age 80, both hemispheres
66.8
Motor facial nucleus nTPM: 157.2
2327
Male, age 80, both hemispheres
201.2
2795
Female, age 91, both hemispheres
180.5
2062
Male, age 76, both hemispheres
162.5
2697
Female, age 85, both hemispheres
146.0
2365
Male, age 74, right hemisphere
132.5
2126
Male, age 61, both hemispheres
120.5
Motor trigeminal nucleus nTPM: 153.2
2335
Male, age 61, both hemispheres
197.0
2309
Male, age 76, both hemispheres
168.6
2560
Male, age 74, both hemispheres
158.7
2079
Male, age 80, both hemispheres
123.4
2321
Female, age 91, both hemispheres
118.1
Nuclei of the trapezoid body nTPM: 162.5
2159
Male, age 61, both hemispheres
185.8
2735
Female, age 85, both hemispheres
172.2
2368
Female, age 91, both hemispheres
164.3
1983
Male, age 76, both hemispheres
163.0
2166
Male, age 80, both hemispheres
127.1
Nucleus raphe magnus nTPM: 170.9
2172
Female, age 85, both hemispheres
219.0
2160
Male, age 61, both hemispheres
202.2
2328
Male, age 80, both hemispheres
173.4
2455
Male, age 74, both hemispheres
169.7
2459
Female, age 91, both hemispheres
139.0
2051
Male, age 76, both hemispheres
122.1
Paramedian reticular nucleus nTPM: 141.6
2313
Male, age 61, both hemispheres
215.5
2057
Male, age 80, both hemispheres
139.6
2050
Female, age 85, both hemispheres
133.2
2052
Male, age 76, both hemispheres
77.9
Pedunculopontine tegmental nucleus nTPM: 122.3
2334
Male, age 80, both hemispheres
150.7
1921
Female, age 85, both hemispheres
124.8
2338
Male, age 61, both hemispheres
91.5
Pontine nuclei nTPM: 128.5
2787
Female, age 85, both hemispheres
218.6
1968
Male, age 76, left hemisphere
157.8
1863
Male, age 55, unknown
141.5
2727
Male, age 61, right hemisphere
119.7
2109
Female, age 72, unknown
107.3
2115
Male, age 80, left hemisphere
105.7
2454
Male, age 74, left hemisphere
98.6
2319
Female, age 91, both hemispheres
79.0
Pontine raphe nucleus nTPM: 137.5
2853
Male, age 76, midline
153.9
2122
Female, age 85, midline
121.1
Posteroventral cochlear nucleus nTPM: 96.8
2752
Female, age 85, both hemispheres
161.4
2371
Male, age 61, both hemispheres
146.1
2070
Male, age 76, both hemispheres
130.6
2341
Male, age 80, both hemispheres
34.5
2135
Female, age 91, both hemispheres
11.5
Principal sensory trigeminal nucleus nTPM: 155.7
2324
Male, age 76, both hemispheres
201.9
2158
Male, age 61, both hemispheres
191.7
2008
Male, age 80, left hemisphere
127.1
2367
Female, age 91, left hemisphere
102.1
Reticular pontine nucleus, caudal nTPM: 142.8
2332
Male, age 80, right hemisphere
208.3
2457
Female, age 91, both hemispheres
136.1
2092
Male, age 76, both hemispheres
116.8
2559
Male, age 74, both hemispheres
109.9
Reticular pontine nucleus, oral nTPM: 111.1
2167
Male, age 76, both hemispheres
135.4
2361
Male, age 74, both hemispheres
111.7
2366
Female, age 91, both hemispheres
110.4
2012
Female, age 85, both hemispheres
101.1
1939
Male, age 80, both hemispheres
97.0
Reticulotegmental nucleus nTPM: 154.5
2452
Male, age 74, both hemispheres
160.1
2322
Female, age 91, both hemispheres
155.8
2325
Male, age 76, both hemispheres
155.1
2333
Male, age 80, both hemispheres
146.9
Spinal trigeminal nucleus, oral nTPM: 171.6
2164
Male, age 80, both hemispheres
200.8
2737
Female, age 85, both hemispheres
164.0
1978
Male, age 76, both hemispheres
149.9
Subcoeruleus area nTPM: 148.5
2323
Female, age 91, left hemisphere
247.1
2451
Male, age 74, both hemispheres
166.1
1958
Male, age 80, both hemispheres
145.4
2089
Male, age 76, left hemisphere
120.4
2369
Female, age 85, left hemisphere
63.4
Superior olive nTPM: 134.1
2561
Female, age 91, both hemispheres
178.6
2329
Male, age 80, right hemisphere
157.6
1875
Female, age 85, both hemispheres
136.7
2020
Male, age 76, both hemispheres
104.1
2364
Male, age 74, right hemisphere
93.7
Ventral periolivary nuclei nTPM: 140.5
2165
Male, age 80, both hemispheres
167.8
2794
Female, age 91, left hemisphere
157.6
2130
Female, age 85, both hemispheres
148.1
2023
Male, age 76, both hemispheres
88.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 130.7
2449
Male, age 74, both hemispheres
152.4
2840
Female, age 85, both hemispheres
138.6
2161
Male, age 80, both hemispheres
131.4
2456
Female, age 91, both hemispheres
125.1
1959
Male, age 76, both hemispheres
120.9
2359
Male, age 61, both hemispheres
115.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
