HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:105.4 nTPM
HPA Brain:53.6 nTPM
GTEx:105.4 nTPM
FANTOM5:57.1 Scaled Tags Per Million
Mouse:217.7 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057236Antibody CAB022549
Glial cells LowHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.6
Sample id Sample description nTPM
Hippocampus
nTPM: 42.6
1898 Male, age 80, left hemisphere 60.8
1855 Male, age 76, left hemisphere 40.6
1911 Female, age 85, right hemisphere 40.5
2621 Female, age 67, right hemisphere 38.3
2529 Female, age 94, left hemisphere 37.8
2148 Female, age 91, left hemisphere 37.7
Dentate gyrus
nTPM: 44.3
1927 Female, age 91, both hemispheres 64.7
2010 Male, age 76, both hemispheres 49.7
2530 Female, age 94, left hemisphere 42.4
2528 Male, age 74, both hemispheres 38.8
2246 Female, age 85, both hemispheres 37.9
2531 Female, age 67, both hemispheres 32.5
Entorhinal gyrus
nTPM: 39.6
1938 Female, age 85, left hemisphere 50.4
2764 Male, age 80, right hemisphere 47.3
1787 Male, age 76, left hemisphere 43.0
2117 Female, age 91, right hemisphere 37.8
2613 Female, age 94, left hemisphere 30.1
2686 Male, age 75, right hemisphere 29.3
Hippocampus, CA1
nTPM: 52.7
2749 Male, age 80, left hemisphere 83.3
1873 Female, age 85, both hemispheres 50.8
2045 Male, age 76, both hemispheres 44.3
2082 Female, age 91, right hemisphere 43.3
2527 Male, age 74, both hemispheres 41.8
Hippocampus, CA2
nTPM: 53.6
1892 Male, age 76, both hemispheres 70.0
1963 Male, age 80, left hemisphere 60.0
2249 Male, age 74, both hemispheres 58.9
1940 Female, age 85, left hemisphere 52.1
2437 Female, age 94, left hemisphere 41.3
2113 Female, age 91, right hemisphere 39.5
Hippocampus, CA3
nTPM: 48.3
2137 Male, age 80, left hemisphere 68.3
1867 Male, age 76, both hemispheres 66.0
2436 Male, age 74, both hemispheres 47.4
1891 Female, age 85, both hemispheres 46.9
2620 Female, age 94, left hemisphere 33.3
2861 Female, age 67, both hemispheres 28.1
Parahippocampal cortex
nTPM: 41.7
1850 Male, age 80, both hemispheres 52.7
1990 Female, age 91, right hemisphere 51.1
1933 Female, age 85, both hemispheres 50.5
2018 Male, age 76, both hemispheres 48.4
2250 Female, age 67, right hemisphere 47.5
2245 Female, age 91, both hemispheres 43.8
2693 Female, age 94, both hemispheres 36.5
2532 Female, age 72, left hemisphere 35.7
2692 Male, age 74, both hemispheres 27.2
2622 Female, age 67, right hemisphere 23.8
Perirhinal gyrus
nTPM: 52.4
1841 Female, age 85, right hemisphere 64.2
1847 Female, age 91, left hemisphere 58.4
1794 Male, age 80, right hemisphere 55.2
2848 Male, age 76, right hemisphere 42.5
2521 Female, age 94, right hemisphere 41.7
Subiculum
nTPM: 38.5
1977 Female, age 85, both hemispheres 50.5
1901 Male, age 80, both hemispheres 49.5
2042 Male, age 76, both hemispheres 41.6
2729 Female, age 91, right hemisphere 35.3
2619 Male, age 74, both hemispheres 30.4
2438 Female, age 94, left hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 105.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.4
Samples: 197

Max nTPM: 387.1
Min nTPM: 48.6
Std nTPM: 37.5
Median nTPM: 99.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 387.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 208.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 196.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 194.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 193.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 181.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 180.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 177.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 174.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 163.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 163.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.1
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 53.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 217.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 216.3
Samples: 4

Max nTPM: 249.3
Min nTPM: 178.4
Sample A Male 221.1
Sample B Male 249.3
Sample C Female 216.3
Sample D Female 178.4
Hippocampal formation
nTPM: 217.8
Samples: 4

Max nTPM: 241.1
Min nTPM: 196.6
Sample A Male 241.1
Sample B Male 215.0
Sample C Female 196.6
Sample D Female 218.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
69734875 Antisense, RP_050503_01_E03, Mouse strain C57BL/6J (56 days, male) 14.9

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