HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.4 nTPM
HPA Brain:167.8 nTPM
GTEx:11.4 nTPM
FANTOM5:121.7 Scaled Tags Per Million
Pig:91.9 nTPM
Mouse:49.2 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034757
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 167.8
Sample id Sample description nTPM
Hippocampus
nTPM: 141.8
1855 Male, age 76, left hemisphere 179.4
2621 Female, age 67, right hemisphere 172.5
2148 Female, age 91, left hemisphere 166.4
1898 Male, age 80, left hemisphere 146.8
2529 Female, age 94, left hemisphere 99.7
1911 Female, age 85, right hemisphere 86.1
Dentate gyrus
nTPM: 143.3
2531 Female, age 67, both hemispheres 170.8
1927 Female, age 91, both hemispheres 164.6
2530 Female, age 94, left hemisphere 156.8
2010 Male, age 76, both hemispheres 131.5
2528 Male, age 74, both hemispheres 117.9
2246 Female, age 85, both hemispheres 117.8
Entorhinal gyrus
nTPM: 117.1
2764 Male, age 80, right hemisphere 149.9
2613 Female, age 94, left hemisphere 136.8
2686 Male, age 75, right hemisphere 119.4
1787 Male, age 76, left hemisphere 111.4
1938 Female, age 85, left hemisphere 105.7
2117 Female, age 91, right hemisphere 79.7
Hippocampus, CA1
nTPM: 144.9
2749 Male, age 80, left hemisphere 196.5
1873 Female, age 85, both hemispheres 143.6
2045 Male, age 76, both hemispheres 139.8
2527 Male, age 74, both hemispheres 130.2
2082 Female, age 91, right hemisphere 114.1
Hippocampus, CA2
nTPM: 119.7
1963 Male, age 80, left hemisphere 167.6
1892 Male, age 76, both hemispheres 131.3
2113 Female, age 91, right hemisphere 112.3
2437 Female, age 94, left hemisphere 111.9
1940 Female, age 85, left hemisphere 107.5
2249 Male, age 74, both hemispheres 87.4
Hippocampus, CA3
nTPM: 135.9
2861 Female, age 67, both hemispheres 216.1
2620 Female, age 94, left hemisphere 180.3
2137 Male, age 80, left hemisphere 162.2
1867 Male, age 76, both hemispheres 95.7
2436 Male, age 74, both hemispheres 87.0
1891 Female, age 85, both hemispheres 74.1
Parahippocampal cortex
nTPM: 139.2
2245 Female, age 91, both hemispheres 189.8
2622 Female, age 67, right hemisphere 188.8
2532 Female, age 72, left hemisphere 162.5
2693 Female, age 94, both hemispheres 156.1
1850 Male, age 80, both hemispheres 139.6
1933 Female, age 85, both hemispheres 131.3
2250 Female, age 67, right hemisphere 127.2
1990 Female, age 91, right hemisphere 110.9
2018 Male, age 76, both hemispheres 107.7
2692 Male, age 74, both hemispheres 78.3
Perirhinal gyrus
nTPM: 167.8
2521 Female, age 94, right hemisphere 200.7
1794 Male, age 80, right hemisphere 177.8
1847 Female, age 91, left hemisphere 172.7
1841 Female, age 85, right hemisphere 148.3
2848 Male, age 76, right hemisphere 139.4
Subiculum
nTPM: 87.5
2729 Female, age 91, right hemisphere 107.0
1977 Female, age 85, both hemispheres 100.6
1901 Male, age 80, both hemispheres 87.1
2619 Male, age 74, both hemispheres 86.9
2042 Male, age 76, both hemispheres 72.5
2438 Female, age 94, left hemisphere 71.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 197

Max nTPM: 39.8
Min nTPM: 0.8
Std nTPM: 7.9
Median nTPM: 9.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 39.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 33.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 29.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 29.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 28.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 28.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 27.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 26.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.7
FF:10153-102I9 76 years, female 124.1
FF:10169-103B7 60 years, female 119.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.9
Pig sample Sample description nTPM
Subiculum
nTPM: 59.3
Samples: 4

Max nTPM: 73.8
Min nTPM: 45.8
Sample A Female 73.8
Sample B Female 45.8
Sample C Male 65.5
Sample D Male 51.9
Dorsal hippocampus
nTPM: 67.2
Samples: 4

Max nTPM: 84.0
Min nTPM: 45.2
Sample A Female 80.6
Sample B Female 84.0
Sample C Male 45.2
Sample D Male 58.8
Entorhinal cortex
nTPM: 91.9
Samples: 4

Max nTPM: 109.5
Min nTPM: 76.2
Sample A Female 109.5
Sample B Female 76.2
Sample C Male 92.1
Sample D Male 89.7
Ventral hippocampus
nTPM: 72.6
Samples: 4

Max nTPM: 90.6
Min nTPM: 55.0
Sample A Female 73.9
Sample B Female 55.0
Sample C Male 90.6
Sample D Male 71.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.2
Samples: 4

Max nTPM: 73.1
Min nTPM: 38.1
Sample A Male 43.6
Sample B Male 41.9
Sample C Female 38.1
Sample D Female 73.1
Hippocampal formation
nTPM: 40.2
Samples: 4

Max nTPM: 59.1
Min nTPM: 26.3
Sample A Male 26.3
Sample B Male 46.2
Sample C Female 59.1
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
73992923 Antisense, RP_051214_03_C01, Mouse strain C57BL/6J (56 days, male) 14.6
69529424 Antisense, RP_050421_04_C06, Mouse strain C57BL/6J (56 days, male) 9.4

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