HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.9 nTPM
HPA Brain:17.8 nTPM
GTEx:13.9 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:11.7 nTPM
Mouse:13.1 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053752Antibody HPA058032
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
1898 Male, age 80, left hemisphere 18.6
2621 Female, age 67, right hemisphere 18.1
2148 Female, age 91, left hemisphere 17.8
2529 Female, age 94, left hemisphere 16.7
1855 Male, age 76, left hemisphere 16.0
1911 Female, age 85, right hemisphere 13.9
Dentate gyrus
nTPM: 16.6
1927 Female, age 91, both hemispheres 18.1
2530 Female, age 94, left hemisphere 17.3
2531 Female, age 67, both hemispheres 16.9
2246 Female, age 85, both hemispheres 16.4
2010 Male, age 76, both hemispheres 16.1
2528 Male, age 74, both hemispheres 15.0
Entorhinal gyrus
nTPM: 17.3
2613 Female, age 94, left hemisphere 20.7
2764 Male, age 80, right hemisphere 19.4
1787 Male, age 76, left hemisphere 17.4
1938 Female, age 85, left hemisphere 17.4
2686 Male, age 75, right hemisphere 14.6
2117 Female, age 91, right hemisphere 14.5
Hippocampus, CA1
nTPM: 16.5
2749 Male, age 80, left hemisphere 22.4
2527 Male, age 74, both hemispheres 16.2
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.8
2045 Male, age 76, both hemispheres 14.1
Hippocampus, CA2
nTPM: 16.9
1963 Male, age 80, left hemisphere 21.2
1892 Male, age 76, both hemispheres 20.9
1940 Female, age 85, left hemisphere 15.9
2437 Female, age 94, left hemisphere 15.7
2113 Female, age 91, right hemisphere 14.1
2249 Male, age 74, both hemispheres 13.6
Hippocampus, CA3
nTPM: 16.7
2861 Female, age 67, both hemispheres 20.4
2137 Male, age 80, left hemisphere 19.5
2620 Female, age 94, left hemisphere 18.8
1867 Male, age 76, both hemispheres 14.0
1891 Female, age 85, both hemispheres 13.8
2436 Male, age 74, both hemispheres 13.8
Parahippocampal cortex
nTPM: 16.1
2245 Female, age 91, both hemispheres 18.4
1850 Male, age 80, both hemispheres 17.0
2622 Female, age 67, right hemisphere 16.8
1990 Female, age 91, right hemisphere 16.7
2250 Female, age 67, right hemisphere 16.6
2532 Female, age 72, left hemisphere 16.6
1933 Female, age 85, both hemispheres 15.5
2692 Male, age 74, both hemispheres 14.9
2693 Female, age 94, both hemispheres 14.4
2018 Male, age 76, both hemispheres 13.7
Perirhinal gyrus
nTPM: 17.8
1794 Male, age 80, right hemisphere 19.5
2521 Female, age 94, right hemisphere 18.6
1847 Female, age 91, left hemisphere 18.5
2848 Male, age 76, right hemisphere 16.7
1841 Female, age 85, right hemisphere 15.6
Subiculum
nTPM: 14.4
1977 Female, age 85, both hemispheres 17.0
1901 Male, age 80, both hemispheres 15.1
2619 Male, age 74, both hemispheres 15.1
2042 Male, age 76, both hemispheres 13.7
2729 Female, age 91, right hemisphere 12.9
2438 Female, age 94, left hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 38.0
Min nTPM: 3.9
Std nTPM: 4.3
Median nTPM: 13.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 28.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 23.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 23.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 22.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 20.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.6
FF:10153-102I9 76 years, female 12.9
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.7
Pig sample Sample description nTPM
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.7
Sample A Female 11.3
Sample B Female 8.7
Sample C Male 9.3
Sample D Male 9.4
Dorsal hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.3
Sample A Female 14.5
Sample B Female 11.7
Sample C Male 10.3
Sample D Male 10.3
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.0
Sample A Female 10.8
Sample B Female 9.8
Sample C Male 9.3
Sample D Male 9.0
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 14.1
Min nTPM: 7.1
Sample A Female 11.1
Sample B Female 7.1
Sample C Male 14.1
Sample D Male 11.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.9
Sample A Male 13.7
Sample B Male 12.2
Sample C Female 10.9
Sample D Female 11.8
Hippocampal formation
nTPM: 13.1
Samples: 4

Max nTPM: 14.3
Min nTPM: 11.8
Sample A Male 11.8
Sample B Male 12.6
Sample C Female 13.8
Sample D Female 14.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
69262345 Antisense, RP_050303_02_C03, Mouse strain C57BL/6J (56 days, male) 2.3

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