HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:63.6 nTPM
HPA Brain:214.7 nTPM
GTEx:63.6 nTPM
FANTOM5:223.6 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:9.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 214.7
Sample id Sample description nTPM
Hippocampus
nTPM: 134.4
1911 Female, age 85, right hemisphere 173.3
2529 Female, age 94, left hemisphere 167.1
2621 Female, age 67, right hemisphere 132.1
1898 Male, age 80, left hemisphere 116.7
1855 Male, age 76, left hemisphere 112.6
2148 Female, age 91, left hemisphere 104.8
Dentate gyrus
nTPM: 146.1
2530 Female, age 94, left hemisphere 207.6
2010 Male, age 76, both hemispheres 194.7
2528 Male, age 74, both hemispheres 169.4
2246 Female, age 85, both hemispheres 117.9
2531 Female, age 67, both hemispheres 96.3
1927 Female, age 91, both hemispheres 91.0
Entorhinal gyrus
nTPM: 143.2
2117 Female, age 91, right hemisphere 240.5
2764 Male, age 80, right hemisphere 173.9
1938 Female, age 85, left hemisphere 124.1
2613 Female, age 94, left hemisphere 117.8
1787 Male, age 76, left hemisphere 108.3
2686 Male, age 75, right hemisphere 94.4
Hippocampus, CA1
nTPM: 106.3
2527 Male, age 74, both hemispheres 131.9
2082 Female, age 91, right hemisphere 129.2
1873 Female, age 85, both hemispheres 128.2
2749 Male, age 80, left hemisphere 86.6
2045 Male, age 76, both hemispheres 55.7
Hippocampus, CA2
nTPM: 147.3
1963 Male, age 80, left hemisphere 185.8
2249 Male, age 74, both hemispheres 174.3
2113 Female, age 91, right hemisphere 151.1
2437 Female, age 94, left hemisphere 148.8
1940 Female, age 85, left hemisphere 134.1
1892 Male, age 76, both hemispheres 89.9
Hippocampus, CA3
nTPM: 111.3
1891 Female, age 85, both hemispheres 241.1
1867 Male, age 76, both hemispheres 133.4
2436 Male, age 74, both hemispheres 113.2
2620 Female, age 94, left hemisphere 74.1
2137 Male, age 80, left hemisphere 69.5
2861 Female, age 67, both hemispheres 36.6
Parahippocampal cortex
nTPM: 124.1
2018 Male, age 76, both hemispheres 174.5
1990 Female, age 91, right hemisphere 170.5
2692 Male, age 74, both hemispheres 166.6
2532 Female, age 72, left hemisphere 164.6
1850 Male, age 80, both hemispheres 129.6
2245 Female, age 91, both hemispheres 115.2
1933 Female, age 85, both hemispheres 112.5
2693 Female, age 94, both hemispheres 92.5
2250 Female, age 67, right hemisphere 73.9
2622 Female, age 67, right hemisphere 40.9
Perirhinal gyrus
nTPM: 78.5
2521 Female, age 94, right hemisphere 92.8
2848 Male, age 76, right hemisphere 86.7
1847 Female, age 91, left hemisphere 75.2
1794 Male, age 80, right hemisphere 74.9
1841 Female, age 85, right hemisphere 63.1
Subiculum
nTPM: 214.7
2042 Male, age 76, both hemispheres 335.7
1901 Male, age 80, both hemispheres 260.9
1977 Female, age 85, both hemispheres 212.7
2438 Female, age 94, left hemisphere 174.0
2619 Male, age 74, both hemispheres 154.9
2729 Female, age 91, right hemisphere 150.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.6
Samples: 197

Max nTPM: 212.8
Min nTPM: 4.8
Std nTPM: 42.1
Median nTPM: 51.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 212.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 203.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 187.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 187.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 179.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 173.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 170.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 153.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 148.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 144.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 140.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 223.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 223.6
FF:10153-102I9 76 years, female 229.2
FF:10169-103B7 60 years, female 218.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.1
Sample A Female 9.1
Sample B Female 16.3
Sample C Male 10.9
Sample D Male 11.5
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 46.3
Min nTPM: 10.5
Sample A Female 45.4
Sample B Female 22.5
Sample C Male 46.3
Sample D Male 10.5
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 14.3
Min nTPM: 8.1
Sample A Female 8.9
Sample B Female 14.3
Sample C Male 8.1
Sample D Male 11.9
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 24.7
Min nTPM: 13.5
Sample A Female 23.1
Sample B Female 13.5
Sample C Male 14.1
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.3
Sample A Male 7.8
Sample B Male 6.3
Sample C Female 7.5
Sample D Female 5.3
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 9.9
Sample C Female 10.1
Sample D Female 8.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
583855 Antisense, RP_040831_01_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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