HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:6.2 nTPM
HPA Brain:32.3 nTPM
GTEx:6.2 nTPM
FANTOM5:38.7 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:18.3 nTPM
Allen mouse:12.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054452
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
1855 Male, age 76, left hemisphere 37.5
1898 Male, age 80, left hemisphere 33.9
2148 Female, age 91, left hemisphere 31.4
2621 Female, age 67, right hemisphere 27.6
1911 Female, age 85, right hemisphere 23.7
2529 Female, age 94, left hemisphere 23.5
Dentate gyrus
nTPM: 27.9
2531 Female, age 67, both hemispheres 32.9
2010 Male, age 76, both hemispheres 30.5
1927 Female, age 91, both hemispheres 29.6
2246 Female, age 85, both hemispheres 29.6
2528 Male, age 74, both hemispheres 25.3
2530 Female, age 94, left hemisphere 19.7
Entorhinal gyrus
nTPM: 25.8
1938 Female, age 85, left hemisphere 28.2
2764 Male, age 80, right hemisphere 28.0
2613 Female, age 94, left hemisphere 26.5
2686 Male, age 75, right hemisphere 24.1
2117 Female, age 91, right hemisphere 24.0
1787 Male, age 76, left hemisphere 23.8
Hippocampus, CA1
nTPM: 32.3
2045 Male, age 76, both hemispheres 44.8
2749 Male, age 80, left hemisphere 34.8
1873 Female, age 85, both hemispheres 32.5
2527 Male, age 74, both hemispheres 24.8
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 26.1
1892 Male, age 76, both hemispheres 31.5
1963 Male, age 80, left hemisphere 29.6
1940 Female, age 85, left hemisphere 28.3
2113 Female, age 91, right hemisphere 24.9
2249 Male, age 74, both hemispheres 22.3
2437 Female, age 94, left hemisphere 19.8
Hippocampus, CA3
nTPM: 29.7
2620 Female, age 94, left hemisphere 35.1
2137 Male, age 80, left hemisphere 33.1
2861 Female, age 67, both hemispheres 30.8
1867 Male, age 76, both hemispheres 30.3
1891 Female, age 85, both hemispheres 26.2
2436 Male, age 74, both hemispheres 22.7
Parahippocampal cortex
nTPM: 26.7
1850 Male, age 80, both hemispheres 32.1
2622 Female, age 67, right hemisphere 29.1
2693 Female, age 94, both hemispheres 28.2
1933 Female, age 85, both hemispheres 27.9
2532 Female, age 72, left hemisphere 26.4
2245 Female, age 91, both hemispheres 26.0
2018 Male, age 76, both hemispheres 25.5
2692 Male, age 74, both hemispheres 24.2
1990 Female, age 91, right hemisphere 23.9
2250 Female, age 67, right hemisphere 23.4
Perirhinal gyrus
nTPM: 30.0
2521 Female, age 94, right hemisphere 33.0
1841 Female, age 85, right hemisphere 30.4
1794 Male, age 80, right hemisphere 30.0
1847 Female, age 91, left hemisphere 29.1
2848 Male, age 76, right hemisphere 27.4
Subiculum
nTPM: 24.7
1977 Female, age 85, both hemispheres 27.1
2729 Female, age 91, right hemisphere 26.3
1901 Male, age 80, both hemispheres 25.3
2042 Male, age 76, both hemispheres 24.3
2619 Male, age 74, both hemispheres 22.9
2438 Female, age 94, left hemisphere 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.2
Samples: 197

Max nTPM: 11.4
Min nTPM: 3.7
Std nTPM: 1.3
Median nTPM: 6.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 11.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 11.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 11.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 9.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 9.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 9.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 9.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 9.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 8.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 8.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.7
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 35.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.8
Sample A Female 12.1
Sample B Female 11.7
Sample C Male 11.8
Sample D Male 9.8
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 11.7
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 11.7
Sample C Male 11.1
Sample D Male 11.3
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 11.1
Sample A Female 11.5
Sample B Female 11.1
Sample C Male 11.8
Sample D Male 11.2
Ventral hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.1
Sample A Female 10.1
Sample B Female 11.3
Sample C Male 13.5
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 20.2
Min nTPM: 16.5
Sample A Male 19.2
Sample B Male 20.2
Sample C Female 17.4
Sample D Female 16.5
Hippocampal formation
nTPM: 16.8
Samples: 4

Max nTPM: 20.4
Min nTPM: 14.4
Sample A Male 17.1
Sample B Male 20.4
Sample C Female 14.4
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
393248 Antisense, RP_040804_02_H07, Mouse strain C57BL/6J (56 days, male) 12.9

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