HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:10.9 nTPM
GTEx:39.8 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:15.3 nTPM
Mouse:43.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054776
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1898 Male, age 80, left hemisphere 15.8
2621 Female, age 67, right hemisphere 12.9
2529 Female, age 94, left hemisphere 10.4
2148 Female, age 91, left hemisphere 8.5
1855 Male, age 76, left hemisphere 7.3
1911 Female, age 85, right hemisphere 7.3
Dentate gyrus
nTPM: 9.8
2246 Female, age 85, both hemispheres 12.0
2530 Female, age 94, left hemisphere 11.7
1927 Female, age 91, both hemispheres 10.5
2010 Male, age 76, both hemispheres 9.7
2531 Female, age 67, both hemispheres 8.4
2528 Male, age 74, both hemispheres 6.4
Entorhinal gyrus
nTPM: 10.0
1938 Female, age 85, left hemisphere 13.6
2613 Female, age 94, left hemisphere 11.9
2764 Male, age 80, right hemisphere 9.7
2686 Male, age 75, right hemisphere 9.2
1787 Male, age 76, left hemisphere 8.4
2117 Female, age 91, right hemisphere 7.0
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 16.3
2527 Male, age 74, both hemispheres 12.9
1873 Female, age 85, both hemispheres 8.3
2045 Male, age 76, both hemispheres 7.5
2082 Female, age 91, right hemisphere 7.4
Hippocampus, CA2
nTPM: 10.2
1892 Male, age 76, both hemispheres 13.7
2249 Male, age 74, both hemispheres 11.2
1963 Male, age 80, left hemisphere 10.7
1940 Female, age 85, left hemisphere 8.7
2113 Female, age 91, right hemisphere 8.4
2437 Female, age 94, left hemisphere 8.3
Hippocampus, CA3
nTPM: 10.0
2137 Male, age 80, left hemisphere 14.9
1867 Male, age 76, both hemispheres 10.5
2436 Male, age 74, both hemispheres 10.1
1891 Female, age 85, both hemispheres 9.4
2861 Female, age 67, both hemispheres 8.2
2620 Female, age 94, left hemisphere 6.8
Parahippocampal cortex
nTPM: 10.9
2250 Female, age 67, right hemisphere 15.2
2532 Female, age 72, left hemisphere 13.0
2245 Female, age 91, both hemispheres 12.8
2018 Male, age 76, both hemispheres 10.6
1933 Female, age 85, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.4
2692 Male, age 74, both hemispheres 9.9
1850 Male, age 80, both hemispheres 9.7
2622 Female, age 67, right hemisphere 9.1
2693 Female, age 94, both hemispheres 8.0
Perirhinal gyrus
nTPM: 10.3
1847 Female, age 91, left hemisphere 11.8
2848 Male, age 76, right hemisphere 10.7
2521 Female, age 94, right hemisphere 10.3
1841 Female, age 85, right hemisphere 10.1
1794 Male, age 80, right hemisphere 8.5
Subiculum
nTPM: 10.3
2438 Female, age 94, left hemisphere 18.0
1901 Male, age 80, both hemispheres 11.5
2619 Male, age 74, both hemispheres 9.5
2042 Male, age 76, both hemispheres 9.1
1977 Female, age 85, both hemispheres 7.9
2729 Female, age 91, right hemisphere 5.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 127.0
Min nTPM: 21.7
Std nTPM: 11.9
Median nTPM: 37.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 127.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 71.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 69.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 67.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 66.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 64.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 63.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 62.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 60.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 60.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.5
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 22.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.3
Pig sample Sample description nTPM
Subiculum
nTPM: 10.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.6
Sample A Female 11.8
Sample B Female 8.6
Sample C Male 10.7
Sample D Male 10.4
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 10.0
Sample A Female 19.7
Sample B Female 16.3
Sample C Male 15.0
Sample D Male 10.0
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 9.3
Sample A Female 11.9
Sample B Female 13.2
Sample C Male 9.7
Sample D Male 9.3
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 17.9
Min nTPM: 10.6
Sample A Female 15.4
Sample B Female 10.6
Sample C Male 11.8
Sample D Male 17.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 52.8
Min nTPM: 34.9
Sample A Male 40.4
Sample B Male 52.8
Sample C Female 44.7
Sample D Female 34.9
Hippocampal formation
nTPM: 40.4
Samples: 4

Max nTPM: 44.5
Min nTPM: 32.6
Sample A Male 44.5
Sample B Male 42.6
Sample C Female 32.6
Sample D Female 41.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74988362 Antisense, RP_060315_05_D05, Mouse strain C57BL/6J (56 days, male) 0.6
70303755 Antisense, RP_050609_02_D06, Mouse strain C57BL/6J (56 days, male) 0.1

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