HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.6 nTPM
HPA Brain:60.9 nTPM
GTEx:16.6 nTPM
FANTOM5:44.0 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:18.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060533
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.9
Sample id Sample description nTPM
Hippocampus
nTPM: 60.9
2529 Female, age 94, left hemisphere 67.4
2148 Female, age 91, left hemisphere 65.9
1855 Male, age 76, left hemisphere 63.4
2621 Female, age 67, right hemisphere 61.8
1911 Female, age 85, right hemisphere 58.8
1898 Male, age 80, left hemisphere 48.3
Dentate gyrus
nTPM: 53.0
2246 Female, age 85, both hemispheres 60.5
2531 Female, age 67, both hemispheres 57.8
1927 Female, age 91, both hemispheres 52.1
2528 Male, age 74, both hemispheres 51.4
2530 Female, age 94, left hemisphere 49.7
2010 Male, age 76, both hemispheres 46.4
Entorhinal gyrus
nTPM: 56.0
2686 Male, age 75, right hemisphere 65.0
1938 Female, age 85, left hemisphere 61.4
2117 Female, age 91, right hemisphere 56.5
2613 Female, age 94, left hemisphere 51.7
1787 Male, age 76, left hemisphere 51.1
2764 Male, age 80, right hemisphere 50.1
Hippocampus, CA1
nTPM: 56.4
2527 Male, age 74, both hemispheres 65.4
2045 Male, age 76, both hemispheres 56.8
2082 Female, age 91, right hemisphere 55.9
1873 Female, age 85, both hemispheres 54.0
2749 Male, age 80, left hemisphere 50.1
Hippocampus, CA2
nTPM: 50.9
2113 Female, age 91, right hemisphere 56.7
2437 Female, age 94, left hemisphere 53.6
2249 Male, age 74, both hemispheres 52.1
1940 Female, age 85, left hemisphere 51.5
1963 Male, age 80, left hemisphere 49.0
1892 Male, age 76, both hemispheres 42.8
Hippocampus, CA3
nTPM: 54.3
2861 Female, age 67, both hemispheres 74.7
2137 Male, age 80, left hemisphere 54.1
2620 Female, age 94, left hemisphere 52.6
1891 Female, age 85, both hemispheres 52.2
2436 Male, age 74, both hemispheres 50.0
1867 Male, age 76, both hemispheres 42.3
Parahippocampal cortex
nTPM: 57.5
2622 Female, age 67, right hemisphere 69.1
2692 Male, age 74, both hemispheres 67.8
1933 Female, age 85, both hemispheres 64.6
2245 Female, age 91, both hemispheres 60.2
2693 Female, age 94, both hemispheres 59.9
2532 Female, age 72, left hemisphere 58.1
2250 Female, age 67, right hemisphere 52.2
1850 Male, age 80, both hemispheres 50.7
1990 Female, age 91, right hemisphere 47.4
2018 Male, age 76, both hemispheres 44.5
Perirhinal gyrus
nTPM: 55.0
2848 Male, age 76, right hemisphere 60.7
2521 Female, age 94, right hemisphere 56.8
1841 Female, age 85, right hemisphere 54.6
1794 Male, age 80, right hemisphere 52.6
1847 Female, age 91, left hemisphere 50.5
Subiculum
nTPM: 53.8
2438 Female, age 94, left hemisphere 59.5
2729 Female, age 91, right hemisphere 58.9
2619 Male, age 74, both hemispheres 57.7
1977 Female, age 85, both hemispheres 51.5
2042 Male, age 76, both hemispheres 48.6
1901 Male, age 80, both hemispheres 46.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 52.5
Min nTPM: 2.7
Std nTPM: 8.5
Median nTPM: 14.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 52.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 41.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 41.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 41.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 41.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 40.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 40.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 39.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 37.1
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 36.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 36.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.0
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.8
Sample A Female 8.8
Sample B Female 10.1
Sample C Male 9.7
Sample D Male 10.7
Dorsal hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.3
Sample A Female 7.7
Sample B Female 7.0
Sample C Male 9.6
Sample D Male 6.3
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.9
Sample A Female 7.9
Sample B Female 10.4
Sample C Male 10.6
Sample D Male 8.8
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.0
Sample A Female 9.3
Sample B Female 8.0
Sample C Male 13.2
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.2
Sample A Male 19.3
Sample B Male 16.2
Sample C Female 18.6
Sample D Female 21.6
Hippocampal formation
nTPM: 16.3
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.9
Sample A Male 15.9
Sample B Male 17.2
Sample C Female 14.9
Sample D Female 17.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69524572 Antisense, RP_050419_04_F03, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org