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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
7.7
nTPM
HPA Brain:
27.9
nTPM
GTEx:
7.7
nTPM
FANTOM5:
64.2
Scaled Tags Per Million
Pig:
34.0
nTPM
Mouse:
34.2
nTPM
Allen mouse:
6.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
27.9
Sample id
Sample description
nTPM
Amygdala nTPM: 27.9
2814
Male, age 76, right hemisphere
39.4
2514
Male, age 75, right hemisphere
26.9
2517
Female, age 94, left hemisphere
26.9
1987
Female, age 91, left hemisphere
23.7
2695
Female, age 67, right hemisphere
22.8
Basal amygdala nTPM: 25.3
1955
Male, age 76, both hemispheres
31.2
2243
Female, age 91, right hemisphere
26.6
2609
Male, age 75, right hemisphere
26.3
2685
Female, age 94, left hemisphere
25.1
2110
Male, age 80, left hemisphere
24.1
2827
Female, age 67, right hemisphere
18.6
Central amygdala nTPM: 24.6
1905
Male, age 76, both hemispheres
35.6
2515
Male, age 75, right hemisphere
24.3
2701
Female, age 91, right hemisphere
21.6
2239
Male, age 80, left hemisphere
21.1
2826
Female, age 94, left hemisphere
20.5
Corticomedial amygdala nTPM: 25.8
2240
Male, age 76, both hemispheres
30.9
2429
Female, age 94, left hemisphere
27.4
2428
Male, age 75, right hemisphere
25.7
2535
Female, age 67, right hemisphere
24.8
2829
Male, age 80, left hemisphere
24.2
2242
Female, age 91, right hemisphere
22.1
Lateral amygdala nTPM: 23.3
1883
Male, age 76, both hemispheres
37.9
2516
Male, age 75, right hemisphere
23.1
2255
Female, age 91, right hemisphere
22.1
2534
Female, age 94, left hemisphere
21.0
2256
Male, age 80, left hemisphere
19.3
2830
Female, age 67, right hemisphere
16.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
7.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 7.7
Samples: 152
Max nTPM: 15.9
Min nTPM: 2.7
Std nTPM: 2.2
Median nTPM: 7.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
15.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
14.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
13.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
12.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
12.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
12.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
11.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
11.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
11.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
11.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
11.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
11.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
11.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
11.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
10.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
10.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
10.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
10.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
10.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
10.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
10.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
10.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
10.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
9.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
9.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
9.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
9.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
9.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
9.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
9.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
9.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
8.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
8.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
8.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
8.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
8.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
8.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
8.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
8.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
8.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
8.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
8.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
8.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
8.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
8.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
8.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
8.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
8.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
8.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
8.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
8.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
8.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
8.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
8.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
8.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
8.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
8.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
8.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
8.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
8.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
8.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
8.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
8.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
7.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
7.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
7.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
7.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
7.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
7.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
7.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
7.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
7.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
7.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
7.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
7.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
7.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
7.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
7.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
7.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
7.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
7.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
7.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
7.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
7.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
7.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
7.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
6.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
6.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
6.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
6.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
6.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
6.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
6.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
6.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
6.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
6.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
6.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
6.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
6.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
6.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
6.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
6.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
6.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
6.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
6.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
6.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
6.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
6.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
6.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
6.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
6.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
6.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
6.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
6.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
6.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
6.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
5.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
5.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
5.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
5.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
5.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
5.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
5.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
5.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
5.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
5.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
5.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
5.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
5.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
5.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
5.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
5.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
5.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
5.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
5.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
4.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
4.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
4.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
4.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
4.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
3.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
3.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
3.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
34.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 34.2
Samples: 4
Max nTPM: 39.1
Min nTPM: 31.3
Sample A
Male
34.4
Sample B
Male
39.1
Sample C
Female
31.3
Sample D
Female
32.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.