HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:8.4 nTPM
HPA Brain:32.7 nTPM
GTEx:8.4 nTPM
FANTOM5:64.1 Scaled Tags Per Million
Pig:71.0 nTPM
Mouse:40.9 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020651
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1898 Male, age 80, left hemisphere 30.4
2621 Female, age 67, right hemisphere 28.4
2148 Female, age 91, left hemisphere 25.7
1911 Female, age 85, right hemisphere 25.6
2529 Female, age 94, left hemisphere 24.5
1855 Male, age 76, left hemisphere 21.7
Dentate gyrus
nTPM: 25.0
1927 Female, age 91, both hemispheres 33.0
2246 Female, age 85, both hemispheres 25.3
2528 Male, age 74, both hemispheres 24.2
2531 Female, age 67, both hemispheres 23.4
2530 Female, age 94, left hemisphere 22.3
2010 Male, age 76, both hemispheres 21.8
Entorhinal gyrus
nTPM: 30.0
2613 Female, age 94, left hemisphere 33.6
2764 Male, age 80, right hemisphere 31.9
1787 Male, age 76, left hemisphere 31.5
1938 Female, age 85, left hemisphere 30.4
2686 Male, age 75, right hemisphere 28.0
2117 Female, age 91, right hemisphere 24.8
Hippocampus, CA1
nTPM: 30.4
2749 Male, age 80, left hemisphere 43.7
2082 Female, age 91, right hemisphere 27.8
2527 Male, age 74, both hemispheres 27.7
2045 Male, age 76, both hemispheres 27.3
1873 Female, age 85, both hemispheres 25.4
Hippocampus, CA2
nTPM: 29.5
1892 Male, age 76, both hemispheres 39.2
2437 Female, age 94, left hemisphere 30.2
2249 Male, age 74, both hemispheres 28.9
1963 Male, age 80, left hemisphere 27.3
2113 Female, age 91, right hemisphere 26.5
1940 Female, age 85, left hemisphere 24.9
Hippocampus, CA3
nTPM: 31.4
2137 Male, age 80, left hemisphere 45.0
1867 Male, age 76, both hemispheres 36.6
2436 Male, age 74, both hemispheres 28.5
1891 Female, age 85, both hemispheres 27.0
2620 Female, age 94, left hemisphere 26.5
2861 Female, age 67, both hemispheres 25.0
Parahippocampal cortex
nTPM: 32.1
2532 Female, age 72, left hemisphere 35.9
2693 Female, age 94, both hemispheres 35.7
2250 Female, age 67, right hemisphere 35.3
1990 Female, age 91, right hemisphere 35.1
1850 Male, age 80, both hemispheres 34.6
2245 Female, age 91, both hemispheres 32.0
2622 Female, age 67, right hemisphere 31.2
1933 Female, age 85, both hemispheres 28.8
2692 Male, age 74, both hemispheres 27.4
2018 Male, age 76, both hemispheres 25.0
Perirhinal gyrus
nTPM: 32.7
1847 Female, age 91, left hemisphere 34.2
2521 Female, age 94, right hemisphere 33.5
1841 Female, age 85, right hemisphere 33.1
1794 Male, age 80, right hemisphere 32.3
2848 Male, age 76, right hemisphere 30.2
Subiculum
nTPM: 26.6
1901 Male, age 80, both hemispheres 34.0
1977 Female, age 85, both hemispheres 28.1
2619 Male, age 74, both hemispheres 28.1
2042 Male, age 76, both hemispheres 23.1
2438 Female, age 94, left hemisphere 23.1
2729 Female, age 91, right hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.4
Samples: 197

Max nTPM: 20.2
Min nTPM: 3.0
Std nTPM: 2.9
Median nTPM: 7.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 17.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 16.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 16.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 15.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 15.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 15.0
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 14.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 14.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 14.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.1
FF:10153-102I9 76 years, female 72.1
FF:10169-103B7 60 years, female 56.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.0
Pig sample Sample description nTPM
Subiculum
nTPM: 45.0
Samples: 4

Max nTPM: 53.5
Min nTPM: 35.5
Sample A Female 53.5
Sample B Female 43.8
Sample C Male 35.5
Sample D Male 47.1
Dorsal hippocampus
nTPM: 33.8
Samples: 4

Max nTPM: 38.2
Min nTPM: 30.7
Sample A Female 30.7
Sample B Female 32.1
Sample C Male 34.0
Sample D Male 38.2
Entorhinal cortex
nTPM: 71.0
Samples: 4

Max nTPM: 76.8
Min nTPM: 62.8
Sample A Female 71.0
Sample B Female 76.8
Sample C Male 62.8
Sample D Male 73.3
Ventral hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 29.6
Min nTPM: 25.2
Sample A Female 29.6
Sample B Female 27.9
Sample C Male 25.2
Sample D Male 27.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 46.3
Min nTPM: 33.4
Sample A Male 41.7
Sample B Male 46.3
Sample C Female 33.4
Sample D Female 42.0
Hippocampal formation
nTPM: 29.8
Samples: 4

Max nTPM: 30.5
Min nTPM: 29.3
Sample A Male 30.0
Sample B Male 30.5
Sample C Female 29.5
Sample D Female 29.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
71724726 Antisense, RP_050921_01_E08, Mouse strain C57BL/6J (56 days, male) 12.6
74431339 Antisense, RP_060207_01_H01, Mouse strain C57BL/6J (56 days, male) 0.7

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