HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.0 nTPM
HPA Brain:22.5 nTPM
GTEx:9.0 nTPM
FANTOM5:19.9 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:0.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046861Antibody HPA048914
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 21.1
1855 Male, age 76, left hemisphere 17.2
2148 Female, age 91, left hemisphere 17.1
2621 Female, age 67, right hemisphere 16.4
2529 Female, age 94, left hemisphere 16.1
1911 Female, age 85, right hemisphere 16.0
Dentate gyrus
nTPM: 19.8
1927 Female, age 91, both hemispheres 22.6
2531 Female, age 67, both hemispheres 20.1
2010 Male, age 76, both hemispheres 19.7
2246 Female, age 85, both hemispheres 19.2
2528 Male, age 74, both hemispheres 18.5
2530 Female, age 94, left hemisphere 18.3
Entorhinal gyrus
nTPM: 19.6
1938 Female, age 85, left hemisphere 24.1
1787 Male, age 76, left hemisphere 22.4
2764 Male, age 80, right hemisphere 20.7
2613 Female, age 94, left hemisphere 19.9
2117 Female, age 91, right hemisphere 16.4
2686 Male, age 75, right hemisphere 13.8
Hippocampus, CA1
nTPM: 20.3
2749 Male, age 80, left hemisphere 24.7
1873 Female, age 85, both hemispheres 21.7
2045 Male, age 76, both hemispheres 21.4
2527 Male, age 74, both hemispheres 18.1
2082 Female, age 91, right hemisphere 15.5
Hippocampus, CA2
nTPM: 18.4
1892 Male, age 76, both hemispheres 24.7
1963 Male, age 80, left hemisphere 20.3
2249 Male, age 74, both hemispheres 17.9
2437 Female, age 94, left hemisphere 17.7
2113 Female, age 91, right hemisphere 15.0
1940 Female, age 85, left hemisphere 14.8
Hippocampus, CA3
nTPM: 18.7
2620 Female, age 94, left hemisphere 21.4
1867 Male, age 76, both hemispheres 19.7
2137 Male, age 80, left hemisphere 18.3
1891 Female, age 85, both hemispheres 17.9
2861 Female, age 67, both hemispheres 17.7
2436 Male, age 74, both hemispheres 17.2
Parahippocampal cortex
nTPM: 18.0
1933 Female, age 85, both hemispheres 22.3
1850 Male, age 80, both hemispheres 21.5
2250 Female, age 67, right hemisphere 20.7
1990 Female, age 91, right hemisphere 20.3
2245 Female, age 91, both hemispheres 18.2
2693 Female, age 94, both hemispheres 17.7
2532 Female, age 72, left hemisphere 16.3
2018 Male, age 76, both hemispheres 15.2
2692 Male, age 74, both hemispheres 14.9
2622 Female, age 67, right hemisphere 13.1
Perirhinal gyrus
nTPM: 22.5
1847 Female, age 91, left hemisphere 26.3
2848 Male, age 76, right hemisphere 22.2
1794 Male, age 80, right hemisphere 22.1
1841 Female, age 85, right hemisphere 21.8
2521 Female, age 94, right hemisphere 20.3
Subiculum
nTPM: 16.6
1977 Female, age 85, both hemispheres 22.6
1901 Male, age 80, both hemispheres 16.7
2438 Female, age 94, left hemisphere 16.7
2729 Female, age 91, right hemisphere 15.3
2619 Male, age 74, both hemispheres 14.2
2042 Male, age 76, both hemispheres 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.0
Samples: 197

Max nTPM: 22.1
Min nTPM: 2.9
Std nTPM: 2.7
Median nTPM: 8.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 22.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 19.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 16.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 14.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 14.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 14.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.9
FF:10153-102I9 76 years, female 20.2
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Subiculum
nTPM: 14.7
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.0
Sample A Female 17.1
Sample B Female 14.2
Sample C Male 16.4
Sample D Male 11.0
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.2
Sample A Female 13.7
Sample B Female 13.2
Sample C Male 12.3
Sample D Male 9.2
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.0
Sample A Female 12.2
Sample B Female 12.0
Sample C Male 14.7
Sample D Male 11.0
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 10.0
Sample A Female 13.1
Sample B Female 12.2
Sample C Male 18.3
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.9
Sample A Male 0.9
Sample B Male 0.9
Sample C Female 1.0
Sample D Female 0.9
Hippocampal formation
nTPM: 0.8
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.5
Sample A Male 0.9
Sample B Male 0.5
Sample C Female 1.0
Sample D Female 0.8

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