HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.7 nTPM
HPA Brain:39.9 nTPM
GTEx:13.7 nTPM
FANTOM5:45.5 Scaled Tags Per Million
Pig:48.7 nTPM
Mouse:104.6 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016573
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.9
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
1898 Male, age 80, left hemisphere 40.5
2621 Female, age 67, right hemisphere 40.0
2148 Female, age 91, left hemisphere 38.5
1855 Male, age 76, left hemisphere 29.5
1911 Female, age 85, right hemisphere 25.1
2529 Female, age 94, left hemisphere 18.8
Dentate gyrus
nTPM: 35.8
1927 Female, age 91, both hemispheres 54.3
2531 Female, age 67, both hemispheres 38.4
2530 Female, age 94, left hemisphere 34.1
2010 Male, age 76, both hemispheres 31.3
2528 Male, age 74, both hemispheres 29.0
2246 Female, age 85, both hemispheres 27.7
Entorhinal gyrus
nTPM: 34.8
2613 Female, age 94, left hemisphere 57.2
2764 Male, age 80, right hemisphere 39.1
1938 Female, age 85, left hemisphere 35.1
1787 Male, age 76, left hemisphere 34.1
2686 Male, age 75, right hemisphere 27.9
2117 Female, age 91, right hemisphere 15.5
Hippocampus, CA1
nTPM: 39.9
2749 Male, age 80, left hemisphere 75.0
1873 Female, age 85, both hemispheres 39.1
2045 Male, age 76, both hemispheres 30.9
2527 Male, age 74, both hemispheres 29.7
2082 Female, age 91, right hemisphere 24.6
Hippocampus, CA2
nTPM: 34.3
1963 Male, age 80, left hemisphere 52.8
1892 Male, age 76, both hemispheres 49.1
2437 Female, age 94, left hemisphere 30.6
1940 Female, age 85, left hemisphere 24.8
2249 Male, age 74, both hemispheres 24.6
2113 Female, age 91, right hemisphere 24.0
Hippocampus, CA3
nTPM: 39.0
2137 Male, age 80, left hemisphere 57.6
2620 Female, age 94, left hemisphere 49.0
2861 Female, age 67, both hemispheres 43.7
1867 Male, age 76, both hemispheres 36.0
1891 Female, age 85, both hemispheres 24.5
2436 Male, age 74, both hemispheres 23.4
Parahippocampal cortex
nTPM: 32.7
1850 Male, age 80, both hemispheres 42.0
1990 Female, age 91, right hemisphere 39.4
2693 Female, age 94, both hemispheres 34.3
2622 Female, age 67, right hemisphere 33.8
2245 Female, age 91, both hemispheres 33.0
2250 Female, age 67, right hemisphere 30.3
1933 Female, age 85, both hemispheres 30.2
2692 Male, age 74, both hemispheres 30.1
2532 Female, age 72, left hemisphere 29.3
2018 Male, age 76, both hemispheres 24.3
Perirhinal gyrus
nTPM: 39.4
1847 Female, age 91, left hemisphere 54.8
1794 Male, age 80, right hemisphere 39.4
1841 Female, age 85, right hemisphere 36.6
2521 Female, age 94, right hemisphere 35.2
2848 Male, age 76, right hemisphere 30.9
Subiculum
nTPM: 24.5
1901 Male, age 80, both hemispheres 31.8
1977 Female, age 85, both hemispheres 30.5
2619 Male, age 74, both hemispheres 25.4
2438 Female, age 94, left hemisphere 20.5
2729 Female, age 91, right hemisphere 20.4
2042 Male, age 76, both hemispheres 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 45.2
Min nTPM: 0.1
Std nTPM: 10.4
Median nTPM: 12.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 38.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 35.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 35.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 34.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 33.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 32.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.5
FF:10169-103B7 60 years, female 62.3
FF:10153-102I9 76 years, female 28.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.7
Pig sample Sample description nTPM
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 51.9
Min nTPM: 36.6
Sample A Female 51.9
Sample B Female 37.5
Sample C Male 39.6
Sample D Male 36.6
Dorsal hippocampus
nTPM: 48.7
Samples: 4

Max nTPM: 59.6
Min nTPM: 28.9
Sample A Female 51.5
Sample B Female 59.6
Sample C Male 28.9
Sample D Male 54.7
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 46.6
Min nTPM: 38.8
Sample A Female 46.6
Sample B Female 42.7
Sample C Male 43.7
Sample D Male 38.8
Ventral hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 48.5
Min nTPM: 36.7
Sample A Female 39.7
Sample B Female 36.7
Sample C Male 48.5
Sample D Male 40.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.6
Samples: 4

Max nTPM: 126.0
Min nTPM: 94.8
Sample A Male 94.8
Sample B Male 101.4
Sample C Female 96.2
Sample D Female 126.0
Hippocampal formation
nTPM: 102.7
Samples: 4

Max nTPM: 121.3
Min nTPM: 89.0
Sample A Male 89.0
Sample B Male 106.3
Sample C Female 121.3
Sample D Female 94.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
69262121 Antisense, RP_050224_01_B06, Mouse strain C57BL/6J (56 days, male) 11.1

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