HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:25.9 nTPM
HPA Brain:37.2 nTPM
GTEx:25.9 nTPM
FANTOM5:53.4 Scaled Tags Per Million
Pig:29.0 nTPM
Mouse:96.8 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.2
Sample id Sample description nTPM
Hippocampus
nTPM: 34.6
1898 Male, age 80, left hemisphere 40.8
1855 Male, age 76, left hemisphere 37.2
2148 Female, age 91, left hemisphere 33.0
2621 Female, age 67, right hemisphere 32.7
2529 Female, age 94, left hemisphere 32.6
1911 Female, age 85, right hemisphere 31.4
Dentate gyrus
nTPM: 34.1
2530 Female, age 94, left hemisphere 43.1
2010 Male, age 76, both hemispheres 38.3
2528 Male, age 74, both hemispheres 35.2
2246 Female, age 85, both hemispheres 31.5
1927 Female, age 91, both hemispheres 29.1
2531 Female, age 67, both hemispheres 27.1
Entorhinal gyrus
nTPM: 34.8
2117 Female, age 91, right hemisphere 41.7
2764 Male, age 80, right hemisphere 40.4
2613 Female, age 94, left hemisphere 38.3
1787 Male, age 76, left hemisphere 32.0
1938 Female, age 85, left hemisphere 31.3
2686 Male, age 75, right hemisphere 25.4
Hippocampus, CA1
nTPM: 37.2
2749 Male, age 80, left hemisphere 55.1
2527 Male, age 74, both hemispheres 36.7
1873 Female, age 85, both hemispheres 36.6
2082 Female, age 91, right hemisphere 28.8
2045 Male, age 76, both hemispheres 28.6
Hippocampus, CA2
nTPM: 35.7
1963 Male, age 80, left hemisphere 51.4
2437 Female, age 94, left hemisphere 34.3
2249 Male, age 74, both hemispheres 34.2
1892 Male, age 76, both hemispheres 33.2
1940 Female, age 85, left hemisphere 31.6
2113 Female, age 91, right hemisphere 29.4
Hippocampus, CA3
nTPM: 32.8
1867 Male, age 76, both hemispheres 34.4
2137 Male, age 80, left hemisphere 33.7
2620 Female, age 94, left hemisphere 33.7
1891 Female, age 85, both hemispheres 33.5
2436 Male, age 74, both hemispheres 32.6
2861 Female, age 67, both hemispheres 28.9
Parahippocampal cortex
nTPM: 30.3
1850 Male, age 80, both hemispheres 36.4
2245 Female, age 91, both hemispheres 32.5
1990 Female, age 91, right hemisphere 32.0
2532 Female, age 72, left hemisphere 31.8
1933 Female, age 85, both hemispheres 31.2
2250 Female, age 67, right hemisphere 30.7
2692 Male, age 74, both hemispheres 30.5
2018 Male, age 76, both hemispheres 27.5
2693 Female, age 94, both hemispheres 26.4
2622 Female, age 67, right hemisphere 23.7
Perirhinal gyrus
nTPM: 33.0
1794 Male, age 80, right hemisphere 38.5
1847 Female, age 91, left hemisphere 36.0
2521 Female, age 94, right hemisphere 33.4
1841 Female, age 85, right hemisphere 28.8
2848 Male, age 76, right hemisphere 28.4
Subiculum
nTPM: 34.7
2042 Male, age 76, both hemispheres 36.2
1901 Male, age 80, both hemispheres 35.5
2438 Female, age 94, left hemisphere 35.0
2619 Male, age 74, both hemispheres 34.0
1977 Female, age 85, both hemispheres 33.6
2729 Female, age 91, right hemisphere 33.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 197

Max nTPM: 46.9
Min nTPM: 12.2
Std nTPM: 6.2
Median nTPM: 25.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 46.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 42.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 42.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 41.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 40.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 39.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 38.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 37.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.4
FF:10153-102I9 76 years, female 56.0
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.0
Pig sample Sample description nTPM
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 26.8
Min nTPM: 15.8
Sample A Female 26.8
Sample B Female 15.8
Sample C Male 20.2
Sample D Male 18.5
Dorsal hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 42.3
Min nTPM: 15.3
Sample A Female 42.3
Sample B Female 23.9
Sample C Male 34.7
Sample D Male 15.3
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.0
Sample A Female 25.1
Sample B Female 22.9
Sample C Male 22.9
Sample D Male 20.0
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 35.4
Min nTPM: 14.1
Sample A Female 30.0
Sample B Female 14.1
Sample C Male 35.4
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 96.8
Samples: 4

Max nTPM: 110.1
Min nTPM: 90.9
Sample A Male 92.9
Sample B Male 93.4
Sample C Female 90.9
Sample D Female 110.1
Hippocampal formation
nTPM: 85.6
Samples: 4

Max nTPM: 92.4
Min nTPM: 79.6
Sample A Male 79.8
Sample B Male 79.6
Sample C Female 92.4
Sample D Female 90.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
67881552 Antisense, RP_041018_01_E09, Mouse strain C57BL/6J (56 days, male) 15.3
75694482 Antisense, RP_060518_03_G11, Mouse strain C57BL/6J (56 days, male) 4.3
77413684 Antisense, RP_070205_01_C09, Mouse strain C57BL/6J (56 days, male) 4.1

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