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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.4
nTPM
HPA Brain:
38.3
nTPM
GTEx:
36.4
nTPM
FANTOM5:
28.0
Scaled Tags Per Million
Pig:
61.3
nTPM
Mouse:
84.7
nTPM
Allen mouse:
7.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
38.3
Sample id
Sample description
nTPM
Amygdala nTPM: 38.3
2814
Male, age 76, right hemisphere
42.0
2695
Female, age 67, right hemisphere
40.9
2514
Male, age 75, right hemisphere
39.5
2517
Female, age 94, left hemisphere
36.6
1987
Female, age 91, left hemisphere
32.7
Basal amygdala nTPM: 32.2
2609
Male, age 75, right hemisphere
42.8
1955
Male, age 76, both hemispheres
34.3
2827
Female, age 67, right hemisphere
30.9
2243
Female, age 91, right hemisphere
30.0
2685
Female, age 94, left hemisphere
29.1
2110
Male, age 80, left hemisphere
26.1
Central amygdala nTPM: 35.4
2826
Female, age 94, left hemisphere
40.4
1905
Male, age 76, both hemispheres
38.3
2515
Male, age 75, right hemisphere
38.1
2701
Female, age 91, right hemisphere
32.2
2239
Male, age 80, left hemisphere
27.8
Corticomedial amygdala nTPM: 30.6
2428
Male, age 75, right hemisphere
38.7
2429
Female, age 94, left hemisphere
31.3
2240
Male, age 76, both hemispheres
30.7
2829
Male, age 80, left hemisphere
29.5
2242
Female, age 91, right hemisphere
28.6
2535
Female, age 67, right hemisphere
24.8
Lateral amygdala nTPM: 35.8
2516
Male, age 75, right hemisphere
41.2
2534
Female, age 94, left hemisphere
37.3
2830
Female, age 67, right hemisphere
36.1
1883
Male, age 76, both hemispheres
35.0
2256
Male, age 80, left hemisphere
33.5
2255
Female, age 91, right hemisphere
31.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
36.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 36.4
Samples: 152
Max nTPM: 59.8
Min nTPM: 20.1
Std nTPM: 8.1
Median nTPM: 35.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
59.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
58.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
58.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
56.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
54.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
53.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
53.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
53.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
52.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
49.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
48.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
48.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
48.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
47.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
46.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
45.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
45.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
45.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
44.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
44.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
44.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
44.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
43.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
43.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
43.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
42.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
42.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
41.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
41.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
41.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
41.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
41.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
41.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
41.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
41.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
41.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
40.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
40.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
40.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
40.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
40.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
40.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
40.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
39.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
39.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
39.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
39.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
39.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
39.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
39.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
39.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
39.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
38.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
38.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
38.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
38.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
38.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
38.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
37.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
37.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
37.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
37.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
36.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
36.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
36.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
36.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
36.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
36.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
36.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
36.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
35.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
35.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
35.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
35.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
35.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
35.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
35.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
35.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
35.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
35.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
34.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
34.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
34.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
33.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
33.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
33.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
33.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
33.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
33.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
33.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
33.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
33.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
32.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
32.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
32.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
32.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
32.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
32.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
32.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
31.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
31.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
31.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
31.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
30.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
30.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
30.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
30.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
30.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
29.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
29.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
29.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
29.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
29.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
29.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
28.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
28.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
28.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
27.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
27.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
27.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
27.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
26.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
26.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
26.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
26.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
26.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
25.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
25.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
25.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
24.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
24.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
24.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
22.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
22.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
21.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
21.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
21.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
20.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
84.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 84.7
Samples: 4
Max nTPM: 95.6
Min nTPM: 77.2
Sample A
Male
77.2
Sample B
Male
83.2
Sample C
Female
95.6
Sample D
Female
82.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
