HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:32.0 nTPM
HPA Brain:33.1 nTPM
GTEx:32.0 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:82.1 nTPM
Mouse:81.5 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004041
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.1
1898 Male, age 80, left hemisphere 36.9
2529 Female, age 94, left hemisphere 36.6
2621 Female, age 67, right hemisphere 36.5
2148 Female, age 91, left hemisphere 30.4
1911 Female, age 85, right hemisphere 30.3
1855 Male, age 76, left hemisphere 27.8
Dentate gyrus
nTPM: 29.5
2530 Female, age 94, left hemisphere 35.2
1927 Female, age 91, both hemispheres 30.5
2528 Male, age 74, both hemispheres 30.5
2010 Male, age 76, both hemispheres 30.2
2246 Female, age 85, both hemispheres 25.8
2531 Female, age 67, both hemispheres 24.7
Entorhinal gyrus
nTPM: 29.0
2117 Female, age 91, right hemisphere 34.3
2764 Male, age 80, right hemisphere 31.4
1787 Male, age 76, left hemisphere 30.6
1938 Female, age 85, left hemisphere 27.4
2686 Male, age 75, right hemisphere 27.2
2613 Female, age 94, left hemisphere 23.3
Hippocampus, CA1
nTPM: 30.6
2527 Male, age 74, both hemispheres 33.9
2749 Male, age 80, left hemisphere 33.3
1873 Female, age 85, both hemispheres 31.2
2045 Male, age 76, both hemispheres 27.5
2082 Female, age 91, right hemisphere 27.0
Hippocampus, CA2
nTPM: 32.0
2249 Male, age 74, both hemispheres 38.9
2437 Female, age 94, left hemisphere 34.1
1963 Male, age 80, left hemisphere 32.7
2113 Female, age 91, right hemisphere 31.2
1892 Male, age 76, both hemispheres 30.0
1940 Female, age 85, left hemisphere 24.9
Hippocampus, CA3
nTPM: 32.3
1867 Male, age 76, both hemispheres 34.2
2861 Female, age 67, both hemispheres 33.5
2137 Male, age 80, left hemisphere 33.1
2436 Male, age 74, both hemispheres 32.9
1891 Female, age 85, both hemispheres 32.0
2620 Female, age 94, left hemisphere 28.4
Parahippocampal cortex
nTPM: 30.0
2018 Male, age 76, both hemispheres 33.8
2245 Female, age 91, both hemispheres 32.3
2622 Female, age 67, right hemisphere 32.2
2692 Male, age 74, both hemispheres 30.8
2250 Female, age 67, right hemisphere 30.2
1990 Female, age 91, right hemisphere 30.0
2532 Female, age 72, left hemisphere 29.1
1850 Male, age 80, both hemispheres 28.3
1933 Female, age 85, both hemispheres 26.8
2693 Female, age 94, both hemispheres 26.3
Perirhinal gyrus
nTPM: 28.9
1841 Female, age 85, right hemisphere 30.6
1794 Male, age 80, right hemisphere 29.9
2848 Male, age 76, right hemisphere 29.3
1847 Female, age 91, left hemisphere 28.3
2521 Female, age 94, right hemisphere 26.5
Subiculum
nTPM: 31.8
2619 Male, age 74, both hemispheres 36.4
2729 Female, age 91, right hemisphere 33.6
1901 Male, age 80, both hemispheres 32.4
2042 Male, age 76, both hemispheres 32.3
2438 Female, age 94, left hemisphere 28.8
1977 Female, age 85, both hemispheres 27.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.0
Samples: 197

Max nTPM: 58.3
Min nTPM: 18.8
Std nTPM: 7.0
Median nTPM: 31.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 58.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 57.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 55.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 53.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 50.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 49.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 49.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 49.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 45.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10153-102I9 76 years, female 34.1
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 82.1
Pig sample Sample description nTPM
Subiculum
nTPM: 66.3
Samples: 4

Max nTPM: 89.4
Min nTPM: 56.0
Sample A Female 89.4
Sample B Female 62.5
Sample C Male 57.2
Sample D Male 56.0
Dorsal hippocampus
nTPM: 82.1
Samples: 4

Max nTPM: 99.4
Min nTPM: 65.5
Sample A Female 99.4
Sample B Female 82.0
Sample C Male 81.3
Sample D Male 65.5
Entorhinal cortex
nTPM: 73.6
Samples: 4

Max nTPM: 84.1
Min nTPM: 59.6
Sample A Female 69.6
Sample B Female 84.1
Sample C Male 81.2
Sample D Male 59.6
Ventral hippocampus
nTPM: 71.1
Samples: 4

Max nTPM: 83.0
Min nTPM: 58.7
Sample A Female 59.6
Sample B Female 58.7
Sample C Male 83.0
Sample D Male 82.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 92.6
Min nTPM: 73.9
Sample A Male 77.1
Sample B Male 82.5
Sample C Female 92.6
Sample D Female 73.9
Hippocampal formation
nTPM: 80.8
Samples: 4

Max nTPM: 87.3
Min nTPM: 71.2
Sample A Male 87.3
Sample B Male 71.2
Sample C Female 83.3
Sample D Female 81.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
68443136 Antisense, RP_050111_01_D08, Mouse strain C57BL/6J (56 days, male) 7.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org