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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
213.0
nTPM
FANTOM5:
212.2
Scaled Tags Per Million
Pig:
157.3
nTPM
Allen mouse:
14.7
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
213.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 73.4
2301
Female, age 85, both hemispheres
98.2
2090
Male, age 80, both hemispheres
70.4
1984
Male, age 76, both hemispheres
64.0
2188
Female, age 91, both hemispheres
61.0
Dorsal cochlear nucleus nTPM: 94.8
2058
Male, age 76, both hemispheres
123.0
2370
Male, age 61, both hemispheres
114.1
2187
Female, age 91, both hemispheres
111.3
2378
Male, age 80, both hemispheres
66.6
2802
Male, age 74, right hemisphere
59.0
Dorsal tegmental nucleus nTPM: 102.3
2083
Male, age 80, both hemispheres
128.9
2358
Male, age 61, both hemispheres
103.7
1936
Male, age 76, left hemisphere
102.7
2326
Male, age 74, both hemispheres
74.0
Dorsolateral tegmental area nTPM: 102.4
2141
Male, age 76, both hemispheres
171.8
2654
Male, age 80, both hemispheres
118.9
2751
Female, age 85, both hemispheres
99.9
2360
Male, age 74, both hemispheres
79.6
2337
Male, age 61, both hemispheres
41.8
Kolliker-Fuse nucleus nTPM: 98.6
2163
Male, age 80, both hemispheres
157.9
2793
Female, age 91, left hemisphere
81.9
2315
Male, age 76, right hemisphere
56.0
Lateral lemniscal nuclei nTPM: 141.1
2453
Male, age 74, right hemisphere
188.3
2169
Male, age 76, both hemispheres
159.3
2036
Male, age 80, both hemispheres
149.7
2746
Female, age 85, left hemisphere
110.9
2320
Female, age 91, left hemisphere
97.1
Lateral parabrachial nucleus nTPM: 98.5
2790
Male, age 61, both hemispheres
136.1
2139
Female, age 85, right hemisphere
132.2
2013
Male, age 80, both hemispheres
90.4
2792
Male, age 76, both hemispheres
35.1
Lateral vestibular nucleus nTPM: 119.7
2184
Male, age 76, both hemispheres
135.3
2311
Male, age 80, both hemispheres
104.2
Locus coeruleus nTPM: 213.0
2720
Male, age 74, both hemispheres
292.8
2123
Female, age 91, both hemispheres
249.6
2317
Female, age 72, unknown
198.3
2162
Male, age 80, both hemispheres
192.6
2788
Male, age 74, unknown
189.3
1980
Male, age 76, both hemispheres
185.6
2014
Male, age 55, unknown
182.8
Medial parabrachial nucleus nTPM: 118.2
2156
Male, age 61, both hemispheres
146.7
2786
Male, age 76, both hemispheres
131.8
2170
Female, age 91, both hemispheres
121.4
2854
Male, age 80, both hemispheres
120.2
2463
Female, age 85, right hemisphere
70.7
Medial periolivary nuclei nTPM: 125.4
2171
Female, age 85, both hemispheres
174.7
2063
Male, age 76, both hemispheres
162.2
2791
Male, age 74, right hemisphere
130.0
2458
Female, age 91, both hemispheres
87.6
2081
Male, age 80, both hemispheres
72.5
Motor facial nucleus nTPM: 140.6
2062
Male, age 76, both hemispheres
176.9
2327
Male, age 80, both hemispheres
161.0
2365
Male, age 74, right hemisphere
160.0
2697
Female, age 85, both hemispheres
122.4
2795
Female, age 91, both hemispheres
113.0
2126
Male, age 61, both hemispheres
110.4
Motor trigeminal nucleus nTPM: 129.4
2335
Male, age 61, both hemispheres
151.8
2309
Male, age 76, both hemispheres
136.3
2560
Male, age 74, both hemispheres
134.7
2079
Male, age 80, both hemispheres
126.9
2321
Female, age 91, both hemispheres
97.1
Nuclei of the trapezoid body nTPM: 155.5
2159
Male, age 61, both hemispheres
197.6
2735
Female, age 85, both hemispheres
190.6
1983
Male, age 76, both hemispheres
162.3
2166
Male, age 80, both hemispheres
114.1
2368
Female, age 91, both hemispheres
112.7
Nucleus raphe magnus nTPM: 168.3
2172
Female, age 85, both hemispheres
215.9
2160
Male, age 61, both hemispheres
214.5
2455
Male, age 74, both hemispheres
211.0
2328
Male, age 80, both hemispheres
139.3
2051
Male, age 76, both hemispheres
126.5
2459
Female, age 91, both hemispheres
102.6
Paramedian reticular nucleus nTPM: 143.5
2313
Male, age 61, both hemispheres
193.8
2050
Female, age 85, both hemispheres
168.1
2057
Male, age 80, both hemispheres
134.7
2052
Male, age 76, both hemispheres
77.2
Pedunculopontine tegmental nucleus nTPM: 128.5
1921
Female, age 85, both hemispheres
152.5
2334
Male, age 80, both hemispheres
145.7
2338
Male, age 61, both hemispheres
87.3
Pontine nuclei nTPM: 126.1
2787
Female, age 85, both hemispheres
205.0
2727
Male, age 61, right hemisphere
158.1
1968
Male, age 76, left hemisphere
142.2
1863
Male, age 55, unknown
122.8
2109
Female, age 72, unknown
117.4
2454
Male, age 74, left hemisphere
113.6
2115
Male, age 80, left hemisphere
83.2
2319
Female, age 91, both hemispheres
66.5
Pontine raphe nucleus nTPM: 176.0
2853
Male, age 76, midline
180.1
2122
Female, age 85, midline
171.9
Posteroventral cochlear nucleus nTPM: 80.4
2752
Female, age 85, both hemispheres
163.5
2070
Male, age 76, both hemispheres
116.2
2371
Male, age 61, both hemispheres
90.2
2341
Male, age 80, both hemispheres
20.8
2135
Female, age 91, both hemispheres
11.2
Principal sensory trigeminal nucleus nTPM: 136.3
2158
Male, age 61, both hemispheres
190.6
2008
Male, age 80, left hemisphere
145.0
2324
Male, age 76, both hemispheres
132.1
2367
Female, age 91, left hemisphere
77.5
Reticular pontine nucleus, caudal nTPM: 112.3
2332
Male, age 80, right hemisphere
162.8
2092
Male, age 76, both hemispheres
112.6
2559
Male, age 74, both hemispheres
88.8
2457
Female, age 91, both hemispheres
85.2
Reticular pontine nucleus, oral nTPM: 114.2
2361
Male, age 74, both hemispheres
134.2
2012
Female, age 85, both hemispheres
132.8
2167
Male, age 76, both hemispheres
121.1
1939
Male, age 80, both hemispheres
108.6
2366
Female, age 91, both hemispheres
74.2
Reticulotegmental nucleus nTPM: 131.6
2325
Male, age 76, both hemispheres
163.2
2452
Male, age 74, both hemispheres
126.9
2322
Female, age 91, both hemispheres
119.6
2333
Male, age 80, both hemispheres
116.5
Spinal trigeminal nucleus, oral nTPM: 138.6
1978
Male, age 76, both hemispheres
153.8
2737
Female, age 85, both hemispheres
132.7
2164
Male, age 80, both hemispheres
129.3
Subcoeruleus area nTPM: 143.8
2323
Female, age 91, left hemisphere
239.9
1958
Male, age 80, both hemispheres
143.8
2089
Male, age 76, left hemisphere
130.7
2451
Male, age 74, both hemispheres
126.3
2369
Female, age 85, left hemisphere
78.2
Superior olive nTPM: 127.1
1875
Female, age 85, both hemispheres
150.6
2364
Male, age 74, right hemisphere
133.5
2329
Male, age 80, right hemisphere
127.1
2561
Female, age 91, both hemispheres
114.0
2020
Male, age 76, both hemispheres
110.4
Ventral periolivary nuclei nTPM: 140.3
2130
Female, age 85, both hemispheres
180.7
2165
Male, age 80, both hemispheres
158.5
2794
Female, age 91, left hemisphere
127.0
2023
Male, age 76, both hemispheres
95.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 121.9
2449
Male, age 74, both hemispheres
193.3
1959
Male, age 76, both hemispheres
122.7
2359
Male, age 61, both hemispheres
115.3
2840
Female, age 85, both hemispheres
113.9
2161
Male, age 80, both hemispheres
110.7
2456
Female, age 91, both hemispheres
75.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
157.3
Pig sample
Sample description
nTPM
Pons nTPM: 157.3
Samples: 4
Max nTPM: 205.5
Min nTPM: 106.8
Sample A
Female
205.5
Sample B
Female
167.3
Sample C
Male
149.6
Sample D
Male
106.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
