HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:20.1 nTPM
HPA Brain:44.3 nTPM
GTEx:20.1 nTPM
FANTOM5:56.6 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:28.7 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041162
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.9
1898 Male, age 80, left hemisphere 43.8
2148 Female, age 91, left hemisphere 42.7
2529 Female, age 94, left hemisphere 41.7
2621 Female, age 67, right hemisphere 40.2
1911 Female, age 85, right hemisphere 37.6
1855 Male, age 76, left hemisphere 33.6
Dentate gyrus
nTPM: 38.1
2246 Female, age 85, both hemispheres 42.3
1927 Female, age 91, both hemispheres 39.5
2528 Male, age 74, both hemispheres 39.1
2530 Female, age 94, left hemisphere 38.9
2531 Female, age 67, both hemispheres 38.2
2010 Male, age 76, both hemispheres 31.0
Entorhinal gyrus
nTPM: 44.3
2117 Female, age 91, right hemisphere 49.9
2764 Male, age 80, right hemisphere 46.9
1938 Female, age 85, left hemisphere 45.5
2686 Male, age 75, right hemisphere 43.1
2613 Female, age 94, left hemisphere 40.2
1787 Male, age 76, left hemisphere 40.1
Hippocampus, CA1
nTPM: 38.4
2527 Male, age 74, both hemispheres 41.7
2082 Female, age 91, right hemisphere 41.3
1873 Female, age 85, both hemispheres 41.0
2749 Male, age 80, left hemisphere 40.7
2045 Male, age 76, both hemispheres 27.2
Hippocampus, CA2
nTPM: 40.2
1963 Male, age 80, left hemisphere 47.4
2113 Female, age 91, right hemisphere 43.7
1940 Female, age 85, left hemisphere 39.5
2437 Female, age 94, left hemisphere 38.7
2249 Male, age 74, both hemispheres 37.8
1892 Male, age 76, both hemispheres 34.0
Hippocampus, CA3
nTPM: 38.1
2861 Female, age 67, both hemispheres 49.0
2137 Male, age 80, left hemisphere 41.5
1891 Female, age 85, both hemispheres 40.4
2620 Female, age 94, left hemisphere 35.1
2436 Male, age 74, both hemispheres 33.1
1867 Male, age 76, both hemispheres 29.6
Parahippocampal cortex
nTPM: 37.8
1933 Female, age 85, both hemispheres 43.9
2692 Male, age 74, both hemispheres 41.8
1850 Male, age 80, both hemispheres 39.9
1990 Female, age 91, right hemisphere 39.7
2250 Female, age 67, right hemisphere 38.4
2622 Female, age 67, right hemisphere 38.1
2245 Female, age 91, both hemispheres 37.2
2693 Female, age 94, both hemispheres 35.7
2532 Female, age 72, left hemisphere 33.5
2018 Male, age 76, both hemispheres 30.2
Perirhinal gyrus
nTPM: 38.4
1847 Female, age 91, left hemisphere 45.2
1794 Male, age 80, right hemisphere 44.5
2521 Female, age 94, right hemisphere 37.0
2848 Male, age 76, right hemisphere 32.8
1841 Female, age 85, right hemisphere 32.5
Subiculum
nTPM: 41.3
1901 Male, age 80, both hemispheres 46.2
2729 Female, age 91, right hemisphere 43.8
1977 Female, age 85, both hemispheres 41.3
2438 Female, age 94, left hemisphere 40.1
2042 Male, age 76, both hemispheres 39.2
2619 Male, age 74, both hemispheres 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 29.6
Min nTPM: 9.3
Std nTPM: 2.8
Median nTPM: 20.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 28.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 26.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 26.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 26.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 26.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 25.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 25.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 25.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 25.3
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 25.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.6
FF:10169-103B7 60 years, female 69.5
FF:10153-102I9 76 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.3
Sample A Female 28.2
Sample B Female 16.5
Sample C Male 17.7
Sample D Male 16.3
Dorsal hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 34.0
Min nTPM: 17.2
Sample A Female 34.0
Sample B Female 19.4
Sample C Male 20.4
Sample D Male 17.2
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.7
Sample A Female 25.5
Sample B Female 22.4
Sample C Male 25.4
Sample D Male 19.7
Ventral hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 25.2
Min nTPM: 14.9
Sample A Female 24.1
Sample B Female 14.9
Sample C Male 25.2
Sample D Male 25.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 27.2
Sample A Male 29.9
Sample B Male 29.9
Sample C Female 27.2
Sample D Female 27.6
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 29.3
Min nTPM: 19.8
Sample A Male 29.3
Sample B Male 19.8
Sample C Female 21.4
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
587438 Antisense, RP_040831_01_G12, Mouse strain C57BL/6J (56 days, male) 10.7
75042260 Antisense, RP_060412_02_D02, Mouse strain C57BL/6J (56 days, male) 7.3

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