HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:495.7 nTPM
HPA Brain:344.0 nTPM
GTEx:495.7 nTPM
FANTOM5:636.1 Scaled Tags Per Million
Pig:220.4 nTPM
Mouse:337.1 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018886
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 344.0
Sample id Sample description nTPM
Hippocampus
nTPM: 289.6
1898 Male, age 80, left hemisphere 381.0
1855 Male, age 76, left hemisphere 322.2
2621 Female, age 67, right hemisphere 287.1
2148 Female, age 91, left hemisphere 260.4
2529 Female, age 94, left hemisphere 258.0
1911 Female, age 85, right hemisphere 229.0
Dentate gyrus
nTPM: 285.6
2010 Male, age 76, both hemispheres 361.1
1927 Female, age 91, both hemispheres 358.4
2530 Female, age 94, left hemisphere 285.7
2246 Female, age 85, both hemispheres 278.5
2528 Male, age 74, both hemispheres 220.6
2531 Female, age 67, both hemispheres 209.5
Entorhinal gyrus
nTPM: 244.6
1938 Female, age 85, left hemisphere 283.5
2764 Male, age 80, right hemisphere 274.3
1787 Male, age 76, left hemisphere 247.4
2686 Male, age 75, right hemisphere 228.1
2613 Female, age 94, left hemisphere 219.7
2117 Female, age 91, right hemisphere 214.3
Hippocampus, CA1
nTPM: 344.0
2749 Male, age 80, left hemisphere 537.0
1873 Female, age 85, both hemispheres 353.1
2045 Male, age 76, both hemispheres 348.2
2527 Male, age 74, both hemispheres 262.2
2082 Female, age 91, right hemisphere 219.4
Hippocampus, CA2
nTPM: 301.4
1892 Male, age 76, both hemispheres 430.0
1963 Male, age 80, left hemisphere 415.9
2249 Male, age 74, both hemispheres 293.5
2437 Female, age 94, left hemisphere 232.3
2113 Female, age 91, right hemisphere 219.9
1940 Female, age 85, left hemisphere 216.8
Hippocampus, CA3
nTPM: 297.3
2137 Male, age 80, left hemisphere 390.8
2436 Male, age 74, both hemispheres 383.7
1867 Male, age 76, both hemispheres 313.4
2861 Female, age 67, both hemispheres 240.0
1891 Female, age 85, both hemispheres 234.2
2620 Female, age 94, left hemisphere 221.6
Parahippocampal cortex
nTPM: 258.8
2245 Female, age 91, both hemispheres 339.2
1850 Male, age 80, both hemispheres 323.9
1933 Female, age 85, both hemispheres 277.9
2018 Male, age 76, both hemispheres 268.9
2250 Female, age 67, right hemisphere 264.5
2532 Female, age 72, left hemisphere 253.1
1990 Female, age 91, right hemisphere 244.7
2693 Female, age 94, both hemispheres 210.0
2622 Female, age 67, right hemisphere 209.5
2692 Male, age 74, both hemispheres 196.0
Perirhinal gyrus
nTPM: 312.0
1847 Female, age 91, left hemisphere 372.3
1794 Male, age 80, right hemisphere 333.9
1841 Female, age 85, right hemisphere 314.8
2848 Male, age 76, right hemisphere 277.9
2521 Female, age 94, right hemisphere 261.1
Subiculum
nTPM: 244.5
1901 Male, age 80, both hemispheres 286.8
1977 Female, age 85, both hemispheres 271.9
2438 Female, age 94, left hemisphere 270.0
2042 Male, age 76, both hemispheres 244.1
2619 Male, age 74, both hemispheres 201.6
2729 Female, age 91, right hemisphere 192.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 495.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 495.7
Samples: 197

Max nTPM: 1153.1
Min nTPM: 200.3
Std nTPM: 198.8
Median nTPM: 466.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1153.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1151.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 1058.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1031.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1022.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 972.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 942.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 911.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 890.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 875.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 871.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 636.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 636.1
FF:10169-103B7 60 years, female 754.0
FF:10153-102I9 76 years, female 518.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 220.4
Pig sample Sample description nTPM
Subiculum
nTPM: 195.7
Samples: 4

Max nTPM: 274.9
Min nTPM: 152.6
Sample A Female 274.9
Sample B Female 179.7
Sample C Male 175.4
Sample D Male 152.6
Dorsal hippocampus
nTPM: 220.4
Samples: 4

Max nTPM: 284.4
Min nTPM: 172.2
Sample A Female 284.4
Sample B Female 212.2
Sample C Male 212.7
Sample D Male 172.2
Entorhinal cortex
nTPM: 183.4
Samples: 4

Max nTPM: 208.7
Min nTPM: 163.8
Sample A Female 208.7
Sample B Female 195.1
Sample C Male 163.8
Sample D Male 165.9
Ventral hippocampus
nTPM: 218.3
Samples: 4

Max nTPM: 247.8
Min nTPM: 159.3
Sample A Female 233.3
Sample B Female 159.3
Sample C Male 247.8
Sample D Male 232.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 337.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 315.8
Samples: 4

Max nTPM: 344.1
Min nTPM: 283.9
Sample A Male 283.9
Sample B Male 318.7
Sample C Female 344.1
Sample D Female 316.3
Hippocampal formation
nTPM: 337.1
Samples: 4

Max nTPM: 387.8
Min nTPM: 317.4
Sample A Male 387.8
Sample B Male 319.2
Sample C Female 317.4
Sample D Female 323.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
1786 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 11.4
1787 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 9.4

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