HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:17.3 nTPM
HPA Brain:27.5 nTPM
GTEx:17.3 nTPM
FANTOM5:13.0 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:20.8 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027464Antibody CAB004510
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.5
Sample id Sample description nTPM
Hippocampus
nTPM: 21.2
2621 Female, age 67, right hemisphere 25.5
1898 Male, age 80, left hemisphere 25.3
2148 Female, age 91, left hemisphere 22.1
1855 Male, age 76, left hemisphere 19.6
1911 Female, age 85, right hemisphere 18.8
2529 Female, age 94, left hemisphere 15.8
Dentate gyrus
nTPM: 21.9
1927 Female, age 91, both hemispheres 27.1
2531 Female, age 67, both hemispheres 24.9
2010 Male, age 76, both hemispheres 22.1
2246 Female, age 85, both hemispheres 20.7
2528 Male, age 74, both hemispheres 18.5
2530 Female, age 94, left hemisphere 17.9
Entorhinal gyrus
nTPM: 21.3
2764 Male, age 80, right hemisphere 26.3
2613 Female, age 94, left hemisphere 22.3
1787 Male, age 76, left hemisphere 21.1
1938 Female, age 85, left hemisphere 20.5
2686 Male, age 75, right hemisphere 20.0
2117 Female, age 91, right hemisphere 17.4
Hippocampus, CA1
nTPM: 27.5
2749 Male, age 80, left hemisphere 49.0
1873 Female, age 85, both hemispheres 24.1
2045 Male, age 76, both hemispheres 23.5
2082 Female, age 91, right hemisphere 21.5
2527 Male, age 74, both hemispheres 19.4
Hippocampus, CA2
nTPM: 21.8
1963 Male, age 80, left hemisphere 30.6
1892 Male, age 76, both hemispheres 24.5
2113 Female, age 91, right hemisphere 20.5
1940 Female, age 85, left hemisphere 19.7
2437 Female, age 94, left hemisphere 18.1
2249 Male, age 74, both hemispheres 17.4
Hippocampus, CA3
nTPM: 25.7
2137 Male, age 80, left hemisphere 34.8
2620 Female, age 94, left hemisphere 31.5
1867 Male, age 76, both hemispheres 27.8
2861 Female, age 67, both hemispheres 27.7
1891 Female, age 85, both hemispheres 16.7
2436 Male, age 74, both hemispheres 15.9
Parahippocampal cortex
nTPM: 22.0
2532 Female, age 72, left hemisphere 25.4
2622 Female, age 67, right hemisphere 24.2
2245 Female, age 91, both hemispheres 23.7
1850 Male, age 80, both hemispheres 23.2
2250 Female, age 67, right hemisphere 21.8
1990 Female, age 91, right hemisphere 21.7
1933 Female, age 85, both hemispheres 21.5
2693 Female, age 94, both hemispheres 21.3
2018 Male, age 76, both hemispheres 19.7
2692 Male, age 74, both hemispheres 17.4
Perirhinal gyrus
nTPM: 23.3
1794 Male, age 80, right hemisphere 26.0
1847 Female, age 91, left hemisphere 24.2
2521 Female, age 94, right hemisphere 24.2
1841 Female, age 85, right hemisphere 24.0
2848 Male, age 76, right hemisphere 18.2
Subiculum
nTPM: 20.0
1901 Male, age 80, both hemispheres 21.9
2729 Female, age 91, right hemisphere 21.1
1977 Female, age 85, both hemispheres 20.3
2042 Male, age 76, both hemispheres 20.3
2619 Male, age 74, both hemispheres 19.1
2438 Female, age 94, left hemisphere 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 37.9
Min nTPM: 5.6
Std nTPM: 6.0
Median nTPM: 17.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 37.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 36.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 33.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 30.6
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 28.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 28.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 28.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 28.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.0
FF:10153-102I9 76 years, female 13.5
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Subiculum
nTPM: 11.7
Samples: 4

Max nTPM: 14.6
Min nTPM: 8.8
Sample A Female 14.6
Sample B Female 8.8
Sample C Male 12.3
Sample D Male 11.2
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.4
Min nTPM: 9.4
Sample A Female 15.4
Sample B Female 14.1
Sample C Male 9.4
Sample D Male 11.1
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.7
Sample A Female 20.0
Sample B Female 12.7
Sample C Male 14.7
Sample D Male 15.6
Ventral hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 16.5
Min nTPM: 7.4
Sample A Female 10.6
Sample B Female 7.4
Sample C Male 14.4
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 18.1
Sample A Male 19.4
Sample B Male 26.7
Sample C Female 18.1
Sample D Female 19.1
Hippocampal formation
nTPM: 20.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 17.3
Sample A Male 17.3
Sample B Male 23.1
Sample C Female 21.3
Sample D Female 18.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68745462 Antisense, RP_050210_02_A05, Mouse strain C57BL/6J (56 days, male) 2.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org