HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.9 nTPM
HPA Brain:119.1 nTPM
GTEx:32.9 nTPM
FANTOM5:84.2 Scaled Tags Per Million
Pig:64.3 nTPM
Mouse:208.5 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 119.1
Sample id Sample description nTPM
Hippocampus
nTPM: 83.9
2621 Female, age 67, right hemisphere 101.5
2148 Female, age 91, left hemisphere 99.7
1898 Male, age 80, left hemisphere 80.3
1855 Male, age 76, left hemisphere 75.8
1911 Female, age 85, right hemisphere 75.2
2529 Female, age 94, left hemisphere 70.6
Dentate gyrus
nTPM: 87.6
2531 Female, age 67, both hemispheres 119.8
1927 Female, age 91, both hemispheres 98.7
2246 Female, age 85, both hemispheres 91.0
2528 Male, age 74, both hemispheres 80.0
2530 Female, age 94, left hemisphere 74.6
2010 Male, age 76, both hemispheres 61.8
Entorhinal gyrus
nTPM: 106.1
1938 Female, age 85, left hemisphere 124.8
2764 Male, age 80, right hemisphere 114.1
2613 Female, age 94, left hemisphere 113.8
1787 Male, age 76, left hemisphere 108.8
2686 Male, age 75, right hemisphere 93.7
2117 Female, age 91, right hemisphere 81.2
Hippocampus, CA1
nTPM: 89.2
2749 Male, age 80, left hemisphere 99.3
2082 Female, age 91, right hemisphere 94.7
2045 Male, age 76, both hemispheres 91.6
2527 Male, age 74, both hemispheres 84.0
1873 Female, age 85, both hemispheres 76.2
Hippocampus, CA2
nTPM: 82.3
2113 Female, age 91, right hemisphere 104.6
2437 Female, age 94, left hemisphere 94.1
1940 Female, age 85, left hemisphere 82.2
1892 Male, age 76, both hemispheres 76.6
2249 Male, age 74, both hemispheres 68.7
1963 Male, age 80, left hemisphere 67.7
Hippocampus, CA3
nTPM: 101.7
2620 Female, age 94, left hemisphere 151.5
2861 Female, age 67, both hemispheres 129.5
2137 Male, age 80, left hemisphere 105.6
2436 Male, age 74, both hemispheres 88.6
1891 Female, age 85, both hemispheres 70.0
1867 Male, age 76, both hemispheres 65.2
Parahippocampal cortex
nTPM: 102.5
2245 Female, age 91, both hemispheres 136.2
1933 Female, age 85, both hemispheres 115.4
2622 Female, age 67, right hemisphere 110.2
2250 Female, age 67, right hemisphere 100.7
1850 Male, age 80, both hemispheres 100.5
2693 Female, age 94, both hemispheres 100.5
1990 Female, age 91, right hemisphere 95.4
2532 Female, age 72, left hemisphere 94.6
2692 Male, age 74, both hemispheres 88.3
2018 Male, age 76, both hemispheres 83.5
Perirhinal gyrus
nTPM: 119.1
1847 Female, age 91, left hemisphere 143.8
1794 Male, age 80, right hemisphere 134.4
2848 Male, age 76, right hemisphere 115.5
2521 Female, age 94, right hemisphere 104.9
1841 Female, age 85, right hemisphere 96.7
Subiculum
nTPM: 79.9
2729 Female, age 91, right hemisphere 88.2
2619 Male, age 74, both hemispheres 86.0
1977 Female, age 85, both hemispheres 81.6
2438 Female, age 94, left hemisphere 80.4
1901 Male, age 80, both hemispheres 73.3
2042 Male, age 76, both hemispheres 69.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 73.5
Min nTPM: 8.4
Std nTPM: 13.2
Median nTPM: 31.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 73.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 69.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 68.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 64.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 64.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 62.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 61.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 61.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 60.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 59.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.2
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 80.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.3
Pig sample Sample description nTPM
Subiculum
nTPM: 48.7
Samples: 4

Max nTPM: 57.9
Min nTPM: 42.2
Sample A Female 57.9
Sample B Female 43.5
Sample C Male 51.1
Sample D Male 42.2
Dorsal hippocampus
nTPM: 64.3
Samples: 4

Max nTPM: 80.5
Min nTPM: 46.8
Sample A Female 65.3
Sample B Female 80.5
Sample C Male 46.8
Sample D Male 64.6
Entorhinal cortex
nTPM: 55.6
Samples: 4

Max nTPM: 66.5
Min nTPM: 44.2
Sample A Female 62.2
Sample B Female 44.2
Sample C Male 66.5
Sample D Male 49.5
Ventral hippocampus
nTPM: 57.5
Samples: 4

Max nTPM: 71.2
Min nTPM: 40.8
Sample A Female 40.8
Sample B Female 49.0
Sample C Male 71.2
Sample D Male 69.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 208.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 208.5
Samples: 4

Max nTPM: 218.5
Min nTPM: 197.2
Sample A Male 218.5
Sample B Male 216.0
Sample C Female 197.2
Sample D Female 202.4
Hippocampal formation
nTPM: 172.1
Samples: 4

Max nTPM: 186.4
Min nTPM: 164.2
Sample A Male 186.4
Sample B Male 173.1
Sample C Female 164.7
Sample D Female 164.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
393201 Antisense, RP_040804_02_C11, Mouse strain C57BL/6J (56 days, male) 14.4

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