HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:8.0 nTPM
HPA Brain:29.5 nTPM
GTEx:8.0 nTPM
FANTOM5:15.4 Scaled Tags Per Million
Pig:7.0 nTPM
Mouse:19.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024482
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.5
2529 Female, age 94, left hemisphere 34.1
2148 Female, age 91, left hemisphere 32.2
1911 Female, age 85, right hemisphere 27.6
2621 Female, age 67, right hemisphere 27.2
1898 Male, age 80, left hemisphere 23.4
1855 Male, age 76, left hemisphere 20.8
Dentate gyrus
nTPM: 27.3
2528 Male, age 74, both hemispheres 31.2
1927 Female, age 91, both hemispheres 30.5
2530 Female, age 94, left hemisphere 28.4
2531 Female, age 67, both hemispheres 26.5
2010 Male, age 76, both hemispheres 24.9
2246 Female, age 85, both hemispheres 22.3
Entorhinal gyrus
nTPM: 29.5
2686 Male, age 75, right hemisphere 33.8
2117 Female, age 91, right hemisphere 32.9
2613 Female, age 94, left hemisphere 31.8
2764 Male, age 80, right hemisphere 28.2
1938 Female, age 85, left hemisphere 26.5
1787 Male, age 76, left hemisphere 23.9
Hippocampus, CA1
nTPM: 25.7
2082 Female, age 91, right hemisphere 30.2
2527 Male, age 74, both hemispheres 29.2
1873 Female, age 85, both hemispheres 27.5
2749 Male, age 80, left hemisphere 21.8
2045 Male, age 76, both hemispheres 19.5
Hippocampus, CA2
nTPM: 27.4
1963 Male, age 80, left hemisphere 39.0
2437 Female, age 94, left hemisphere 29.8
2113 Female, age 91, right hemisphere 27.4
2249 Male, age 74, both hemispheres 24.3
1940 Female, age 85, left hemisphere 23.2
1892 Male, age 76, both hemispheres 20.6
Hippocampus, CA3
nTPM: 25.3
2861 Female, age 67, both hemispheres 29.4
1891 Female, age 85, both hemispheres 26.1
2137 Male, age 80, left hemisphere 25.0
2620 Female, age 94, left hemisphere 24.9
1867 Male, age 76, both hemispheres 23.8
2436 Male, age 74, both hemispheres 22.7
Parahippocampal cortex
nTPM: 27.5
2692 Male, age 74, both hemispheres 35.1
2622 Female, age 67, right hemisphere 35.0
2693 Female, age 94, both hemispheres 30.7
1990 Female, age 91, right hemisphere 27.2
1933 Female, age 85, both hemispheres 26.5
2250 Female, age 67, right hemisphere 25.4
2245 Female, age 91, both hemispheres 25.1
2532 Female, age 72, left hemisphere 24.3
2018 Male, age 76, both hemispheres 24.2
1850 Male, age 80, both hemispheres 22.0
Perirhinal gyrus
nTPM: 23.7
2521 Female, age 94, right hemisphere 28.0
1847 Female, age 91, left hemisphere 25.9
1794 Male, age 80, right hemisphere 24.3
1841 Female, age 85, right hemisphere 22.6
2848 Male, age 76, right hemisphere 17.6
Subiculum
nTPM: 28.3
2619 Male, age 74, both hemispheres 36.7
2729 Female, age 91, right hemisphere 30.4
1901 Male, age 80, both hemispheres 28.1
2042 Male, age 76, both hemispheres 27.5
1977 Female, age 85, both hemispheres 23.8
2438 Female, age 94, left hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.0
Samples: 197

Max nTPM: 19.6
Min nTPM: 3.1
Std nTPM: 2.6
Median nTPM: 7.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 19.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 16.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 16.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 16.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 14.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 13.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 13.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 13.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 12.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 12.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.4
FF:10153-102I9 76 years, female 18.5
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.0
Pig sample Sample description nTPM
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.6
Sample A Female 6.9
Sample B Female 5.6
Sample C Male 5.7
Sample D Male 6.9
Dorsal hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.8
Sample A Female 6.3
Sample B Female 6.5
Sample C Male 5.9
Sample D Male 5.8
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.5
Sample A Female 7.5
Sample B Female 7.3
Sample C Male 7.5
Sample D Male 5.5
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 5.9
Sample C Male 8.4
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.0
Sample A Male 16.2
Sample B Male 13.0
Sample C Female 19.9
Sample D Female 17.3
Hippocampal formation
nTPM: 19.1
Samples: 4

Max nTPM: 20.4
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 18.8
Sample C Female 20.4
Sample D Female 19.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69014824 Antisense, RP_050310_01_G08, Mouse strain C57BL/6J (56 days, male) 0.1

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