HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:39.9 nTPM
HPA Brain:29.6 nTPM
GTEx:39.9 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:32.1 nTPM
Mouse:24.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041404Antibody HPA048250
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1898 Male, age 80, left hemisphere 30.7
2621 Female, age 67, right hemisphere 26.5
1911 Female, age 85, right hemisphere 26.3
1855 Male, age 76, left hemisphere 26.2
2148 Female, age 91, left hemisphere 26.0
2529 Female, age 94, left hemisphere 21.9
Dentate gyrus
nTPM: 28.9
2530 Female, age 94, left hemisphere 38.5
2010 Male, age 76, both hemispheres 33.9
2528 Male, age 74, both hemispheres 25.9
1927 Female, age 91, both hemispheres 25.7
2531 Female, age 67, both hemispheres 25.3
2246 Female, age 85, both hemispheres 24.3
Entorhinal gyrus
nTPM: 28.4
2613 Female, age 94, left hemisphere 31.7
2764 Male, age 80, right hemisphere 31.4
2686 Male, age 75, right hemisphere 30.7
2117 Female, age 91, right hemisphere 27.0
1938 Female, age 85, left hemisphere 26.0
1787 Male, age 76, left hemisphere 23.7
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 44.1
1873 Female, age 85, both hemispheres 34.4
2045 Male, age 76, both hemispheres 24.8
2527 Male, age 74, both hemispheres 24.2
2082 Female, age 91, right hemisphere 20.3
Hippocampus, CA2
nTPM: 27.4
1963 Male, age 80, left hemisphere 38.1
1892 Male, age 76, both hemispheres 30.2
2437 Female, age 94, left hemisphere 27.8
2249 Male, age 74, both hemispheres 24.2
1940 Female, age 85, left hemisphere 23.7
2113 Female, age 91, right hemisphere 20.4
Hippocampus, CA3
nTPM: 27.1
1867 Male, age 76, both hemispheres 31.3
2861 Female, age 67, both hemispheres 30.9
2620 Female, age 94, left hemisphere 27.0
2137 Male, age 80, left hemisphere 26.5
1891 Female, age 85, both hemispheres 24.5
2436 Male, age 74, both hemispheres 22.8
Parahippocampal cortex
nTPM: 25.5
2622 Female, age 67, right hemisphere 32.8
1933 Female, age 85, both hemispheres 28.4
2532 Female, age 72, left hemisphere 28.2
2245 Female, age 91, both hemispheres 25.9
2693 Female, age 94, both hemispheres 25.3
1850 Male, age 80, both hemispheres 23.7
2250 Female, age 67, right hemisphere 23.7
2692 Male, age 74, both hemispheres 23.3
1990 Female, age 91, right hemisphere 22.3
2018 Male, age 76, both hemispheres 21.3
Perirhinal gyrus
nTPM: 22.4
2521 Female, age 94, right hemisphere 25.1
1847 Female, age 91, left hemisphere 24.3
1841 Female, age 85, right hemisphere 22.5
1794 Male, age 80, right hemisphere 21.8
2848 Male, age 76, right hemisphere 18.3
Subiculum
nTPM: 24.0
1977 Female, age 85, both hemispheres 29.2
1901 Male, age 80, both hemispheres 24.3
2042 Male, age 76, both hemispheres 24.3
2729 Female, age 91, right hemisphere 23.8
2619 Male, age 74, both hemispheres 23.4
2438 Female, age 94, left hemisphere 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.9
Samples: 197

Max nTPM: 89.7
Min nTPM: 11.7
Std nTPM: 12.2
Median nTPM: 37.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 89.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 71.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 70.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 70.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 69.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 66.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 64.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 63.4
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 63.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 62.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 61.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 33.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.1
Pig sample Sample description nTPM
Subiculum
nTPM: 29.0
Samples: 4

Max nTPM: 36.8
Min nTPM: 25.5
Sample A Female 36.8
Sample B Female 26.8
Sample C Male 27.0
Sample D Male 25.5
Dorsal hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 42.2
Min nTPM: 23.8
Sample A Female 42.2
Sample B Female 35.8
Sample C Male 23.8
Sample D Male 26.1
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 33.1
Min nTPM: 25.5
Sample A Female 29.1
Sample B Female 28.4
Sample C Male 33.1
Sample D Male 25.5
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 38.0
Min nTPM: 25.1
Sample A Female 33.7
Sample B Female 25.1
Sample C Male 38.0
Sample D Male 31.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.8
Min nTPM: 19.9
Sample A Male 27.8
Sample B Male 26.6
Sample C Female 19.9
Sample D Female 22.0
Hippocampal formation
nTPM: 22.6
Samples: 4

Max nTPM: 23.7
Min nTPM: 21.5
Sample A Male 23.7
Sample B Male 22.5
Sample C Female 21.5
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
79536365 Antisense, RP_071018_01_A06, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org