HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:57.9 nTPM
HPA Brain:31.4 nTPM
GTEx:57.9 nTPM
FANTOM5:40.6 Scaled Tags Per Million
Pig:56.1 nTPM
Mouse:34.6 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041714
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.1
1898 Male, age 80, left hemisphere 29.0
2529 Female, age 94, left hemisphere 24.6
1855 Male, age 76, left hemisphere 24.0
1911 Female, age 85, right hemisphere 22.3
2621 Female, age 67, right hemisphere 17.4
2148 Female, age 91, left hemisphere 15.4
Dentate gyrus
nTPM: 22.9
2530 Female, age 94, left hemisphere 31.3
2010 Male, age 76, both hemispheres 27.0
2246 Female, age 85, both hemispheres 24.7
1927 Female, age 91, both hemispheres 23.6
2528 Male, age 74, both hemispheres 17.0
2531 Female, age 67, both hemispheres 14.0
Entorhinal gyrus
nTPM: 23.6
2764 Male, age 80, right hemisphere 31.0
1938 Female, age 85, left hemisphere 27.9
1787 Male, age 76, left hemisphere 25.5
2117 Female, age 91, right hemisphere 20.4
2613 Female, age 94, left hemisphere 18.8
2686 Male, age 75, right hemisphere 18.1
Hippocampus, CA1
nTPM: 24.3
2749 Male, age 80, left hemisphere 32.6
2045 Male, age 76, both hemispheres 25.2
1873 Female, age 85, both hemispheres 23.6
2527 Male, age 74, both hemispheres 21.7
2082 Female, age 91, right hemisphere 18.2
Hippocampus, CA2
nTPM: 27.0
1892 Male, age 76, both hemispheres 36.0
1963 Male, age 80, left hemisphere 34.3
2249 Male, age 74, both hemispheres 29.4
1940 Female, age 85, left hemisphere 26.2
2437 Female, age 94, left hemisphere 19.6
2113 Female, age 91, right hemisphere 16.4
Hippocampus, CA3
nTPM: 22.5
2137 Male, age 80, left hemisphere 30.7
1867 Male, age 76, both hemispheres 28.4
1891 Female, age 85, both hemispheres 22.6
2436 Male, age 74, both hemispheres 19.6
2620 Female, age 94, left hemisphere 18.1
2861 Female, age 67, both hemispheres 15.4
Parahippocampal cortex
nTPM: 22.0
1850 Male, age 80, both hemispheres 29.8
1933 Female, age 85, both hemispheres 26.5
2018 Male, age 76, both hemispheres 25.3
2245 Female, age 91, both hemispheres 24.5
2250 Female, age 67, right hemisphere 22.0
2532 Female, age 72, left hemisphere 21.2
1990 Female, age 91, right hemisphere 20.5
2693 Female, age 94, both hemispheres 17.0
2692 Male, age 74, both hemispheres 16.9
2622 Female, age 67, right hemisphere 16.0
Perirhinal gyrus
nTPM: 31.4
1847 Female, age 91, left hemisphere 39.1
1794 Male, age 80, right hemisphere 36.5
1841 Female, age 85, right hemisphere 30.4
2848 Male, age 76, right hemisphere 25.7
2521 Female, age 94, right hemisphere 25.3
Subiculum
nTPM: 23.1
1977 Female, age 85, both hemispheres 31.9
1901 Male, age 80, both hemispheres 27.0
2042 Male, age 76, both hemispheres 21.2
2438 Female, age 94, left hemisphere 20.3
2729 Female, age 91, right hemisphere 20.2
2619 Male, age 74, both hemispheres 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.9
Samples: 197

Max nTPM: 137.9
Min nTPM: 15.1
Std nTPM: 21.0
Median nTPM: 55.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 137.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 133.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 127.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 120.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 109.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 107.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 102.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 101.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 98.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 96.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 96.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.6
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 29.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.1
Pig sample Sample description nTPM
Subiculum
nTPM: 47.7
Samples: 4

Max nTPM: 73.1
Min nTPM: 35.2
Sample A Female 73.1
Sample B Female 41.4
Sample C Male 41.0
Sample D Male 35.2
Dorsal hippocampus
nTPM: 56.1
Samples: 4

Max nTPM: 75.3
Min nTPM: 38.1
Sample A Female 75.3
Sample B Female 54.2
Sample C Male 56.7
Sample D Male 38.1
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 55.4
Min nTPM: 33.6
Sample A Female 48.9
Sample B Female 55.4
Sample C Male 44.0
Sample D Male 33.6
Ventral hippocampus
nTPM: 54.5
Samples: 4

Max nTPM: 62.9
Min nTPM: 44.9
Sample A Female 59.3
Sample B Female 44.9
Sample C Male 62.9
Sample D Male 50.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 33.5
Min nTPM: 27.6
Sample A Male 27.6
Sample B Male 29.7
Sample C Female 32.8
Sample D Female 33.5
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 41.1
Min nTPM: 30.4
Sample A Male 41.1
Sample B Male 30.4
Sample C Female 34.9
Sample D Female 32.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
68744630 Antisense, RP_050208_01_C08, Mouse strain C57BL/6J (56 days, male) 2.1

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