HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:31.1 nTPM
HPA Brain:23.7 nTPM
GTEx:31.1 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:8.3 nTPM
Mouse:14.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014500
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.8
1898 Male, age 80, left hemisphere 25.9
2621 Female, age 67, right hemisphere 23.7
2529 Female, age 94, left hemisphere 23.4
1911 Female, age 85, right hemisphere 20.2
2148 Female, age 91, left hemisphere 17.4
1855 Male, age 76, left hemisphere 14.1
Dentate gyrus
nTPM: 21.1
2530 Female, age 94, left hemisphere 30.9
2528 Male, age 74, both hemispheres 21.4
2531 Female, age 67, both hemispheres 19.4
2010 Male, age 76, both hemispheres 18.8
2246 Female, age 85, both hemispheres 18.4
1927 Female, age 91, both hemispheres 17.9
Entorhinal gyrus
nTPM: 22.1
2613 Female, age 94, left hemisphere 25.1
2764 Male, age 80, right hemisphere 24.3
1787 Male, age 76, left hemisphere 21.1
2686 Male, age 75, right hemisphere 20.9
2117 Female, age 91, right hemisphere 20.8
1938 Female, age 85, left hemisphere 20.3
Hippocampus, CA1
nTPM: 20.7
2749 Male, age 80, left hemisphere 27.2
2527 Male, age 74, both hemispheres 22.2
2082 Female, age 91, right hemisphere 21.1
1873 Female, age 85, both hemispheres 18.8
2045 Male, age 76, both hemispheres 14.5
Hippocampus, CA2
nTPM: 22.7
2437 Female, age 94, left hemisphere 27.5
2249 Male, age 74, both hemispheres 25.1
1963 Male, age 80, left hemisphere 23.8
1940 Female, age 85, left hemisphere 20.3
1892 Male, age 76, both hemispheres 20.0
2113 Female, age 91, right hemisphere 19.4
Hippocampus, CA3
nTPM: 23.7
2436 Male, age 74, both hemispheres 36.0
2861 Female, age 67, both hemispheres 27.9
1867 Male, age 76, both hemispheres 21.0
1891 Female, age 85, both hemispheres 19.4
2137 Male, age 80, left hemisphere 19.4
2620 Female, age 94, left hemisphere 18.7
Parahippocampal cortex
nTPM: 20.3
1990 Female, age 91, right hemisphere 24.9
1933 Female, age 85, both hemispheres 21.6
2250 Female, age 67, right hemisphere 21.5
2622 Female, age 67, right hemisphere 21.1
2245 Female, age 91, both hemispheres 20.3
2018 Male, age 76, both hemispheres 20.1
2692 Male, age 74, both hemispheres 19.7
1850 Male, age 80, both hemispheres 19.2
2532 Female, age 72, left hemisphere 17.7
2693 Female, age 94, both hemispheres 16.5
Perirhinal gyrus
nTPM: 19.3
1847 Female, age 91, left hemisphere 23.3
1794 Male, age 80, right hemisphere 21.3
1841 Female, age 85, right hemisphere 18.1
2521 Female, age 94, right hemisphere 17.9
2848 Male, age 76, right hemisphere 15.7
Subiculum
nTPM: 19.7
2619 Male, age 74, both hemispheres 21.6
1977 Female, age 85, both hemispheres 20.8
1901 Male, age 80, both hemispheres 20.5
2438 Female, age 94, left hemisphere 19.6
2042 Male, age 76, both hemispheres 18.1
2729 Female, age 91, right hemisphere 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.1
Samples: 197

Max nTPM: 81.4
Min nTPM: 11.8
Std nTPM: 10.9
Median nTPM: 29.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 81.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 79.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 58.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 58.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 58.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 56.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 55.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 53.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 52.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 52.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 51.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.7
FF:10153-102I9 76 years, female 20.8
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.3
Pig sample Sample description nTPM
Subiculum
nTPM: 6.6
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.2
Sample A Female 6.5
Sample B Female 6.2
Sample C Male 7.6
Sample D Male 6.2
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.3
Min nTPM: 6.5
Sample A Female 7.1
Sample B Female 7.3
Sample C Male 6.7
Sample D Male 6.5
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 9.3
Sample C Male 10.1
Sample D Male 6.9
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 10.1
Min nTPM: 5.8
Sample A Female 6.8
Sample B Female 5.8
Sample C Male 10.1
Sample D Male 7.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.5
Sample A Male 14.5
Sample B Male 14.4
Sample C Female 16.6
Sample D Female 13.5
Hippocampal formation
nTPM: 14.9
Samples: 4

Max nTPM: 18.0
Min nTPM: 11.7
Sample A Male 15.0
Sample B Male 11.7
Sample C Female 14.7
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
67792188 Antisense, RP_040920_01_C06, Mouse strain C57BL/6J (56 days, male) 0.2

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