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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
405.1
nTPM
FANTOM5:
452.5
Scaled Tags Per Million
Pig:
444.2
nTPM
Allen mouse:
0.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
405.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 259.6
1984
Male, age 76, both hemispheres
336.3
2188
Female, age 91, both hemispheres
239.5
2301
Female, age 85, both hemispheres
236.7
2090
Male, age 80, both hemispheres
225.7
Dorsal cochlear nucleus nTPM: 254.2
2058
Male, age 76, both hemispheres
297.1
2802
Male, age 74, right hemisphere
256.2
2187
Female, age 91, both hemispheres
247.4
2370
Male, age 61, both hemispheres
244.2
2378
Male, age 80, both hemispheres
226.1
Dorsal tegmental nucleus nTPM: 274.3
2083
Male, age 80, both hemispheres
318.4
1936
Male, age 76, left hemisphere
264.2
2326
Male, age 74, both hemispheres
258.2
2358
Male, age 61, both hemispheres
256.5
Dorsolateral tegmental area nTPM: 276.6
2751
Female, age 85, both hemispheres
306.8
2141
Male, age 76, both hemispheres
300.2
2654
Male, age 80, both hemispheres
296.4
2360
Male, age 74, both hemispheres
291.0
2337
Male, age 61, both hemispheres
188.6
Kolliker-Fuse nucleus nTPM: 298.2
2163
Male, age 80, both hemispheres
379.2
2315
Male, age 76, right hemisphere
273.0
2793
Female, age 91, left hemisphere
242.6
Lateral lemniscal nuclei nTPM: 348.6
2169
Male, age 76, both hemispheres
453.8
2036
Male, age 80, both hemispheres
419.3
2746
Female, age 85, left hemisphere
361.2
2453
Male, age 74, right hemisphere
296.9
2320
Female, age 91, left hemisphere
212.0
Lateral parabrachial nucleus nTPM: 278.3
2139
Female, age 85, right hemisphere
417.2
2013
Male, age 80, both hemispheres
293.7
2790
Male, age 61, both hemispheres
218.4
2792
Male, age 76, both hemispheres
183.8
Lateral vestibular nucleus nTPM: 316.3
2184
Male, age 76, both hemispheres
380.2
2311
Male, age 80, both hemispheres
252.4
Locus coeruleus nTPM: 401.1
2123
Female, age 91, both hemispheres
565.6
2014
Male, age 55, unknown
449.7
2720
Male, age 74, both hemispheres
384.6
2317
Female, age 72, unknown
378.2
1980
Male, age 76, both hemispheres
376.1
2788
Male, age 74, unknown
336.5
2162
Male, age 80, both hemispheres
317.1
Medial parabrachial nucleus nTPM: 293.8
2854
Male, age 80, both hemispheres
333.2
2170
Female, age 91, both hemispheres
321.6
2463
Female, age 85, right hemisphere
282.2
2156
Male, age 61, both hemispheres
269.6
2786
Male, age 76, both hemispheres
262.5
Medial periolivary nuclei nTPM: 334.8
2171
Female, age 85, both hemispheres
511.7
2063
Male, age 76, both hemispheres
454.1
2791
Male, age 74, right hemisphere
313.9
2081
Male, age 80, both hemispheres
203.8
2458
Female, age 91, both hemispheres
190.5
Motor facial nucleus nTPM: 325.1
2062
Male, age 76, both hemispheres
486.7
2365
Male, age 74, right hemisphere
360.9
2697
Female, age 85, both hemispheres
310.4
2327
Male, age 80, both hemispheres
274.5
2126
Male, age 61, both hemispheres
269.9
2795
Female, age 91, both hemispheres
248.3
Motor trigeminal nucleus nTPM: 263.5
2079
Male, age 80, both hemispheres
326.6
2560
Male, age 74, both hemispheres
270.4
2309
Male, age 76, both hemispheres
268.1
2335
Male, age 61, both hemispheres
258.5
2321
Female, age 91, both hemispheres
193.8
Nuclei of the trapezoid body nTPM: 405.1
2159
Male, age 61, both hemispheres
560.0
2735
Female, age 85, both hemispheres
498.2
1983
Male, age 76, both hemispheres
453.6
2166
Male, age 80, both hemispheres
298.3
2368
Female, age 91, both hemispheres
215.6
Nucleus raphe magnus nTPM: 401.0
2160
Male, age 61, both hemispheres
618.9
2172
Female, age 85, both hemispheres
513.0
2455
Male, age 74, both hemispheres
407.0
2051
Male, age 76, both hemispheres
349.6
2328
Male, age 80, both hemispheres
302.2
2459
Female, age 91, both hemispheres
215.3
Paramedian reticular nucleus nTPM: 361.8
2050
Female, age 85, both hemispheres
457.0
2057
Male, age 80, both hemispheres
391.3
2313
Male, age 61, both hemispheres
359.4
2052
Male, age 76, both hemispheres
239.4
Pedunculopontine tegmental nucleus nTPM: 297.2
1921
Female, age 85, both hemispheres
339.4
2334
Male, age 80, both hemispheres
304.3
2338
Male, age 61, both hemispheres
248.1
Pontine nuclei nTPM: 400.3
2787
Female, age 85, both hemispheres
568.8
2727
Male, age 61, right hemisphere
550.0
1863
Male, age 55, unknown
515.1
1968
Male, age 76, left hemisphere
411.2
2109
Female, age 72, unknown
403.2
2115
Male, age 80, left hemisphere
268.0
2454
Male, age 74, left hemisphere
258.2
2319
Female, age 91, both hemispheres
227.7
Pontine raphe nucleus nTPM: 384.3
2122
Female, age 85, midline
438.9
2853
Male, age 76, midline
329.7
Posteroventral cochlear nucleus nTPM: 264.2
2752
Female, age 85, both hemispheres
393.5
2070
Male, age 76, both hemispheres
313.8
2371
Male, age 61, both hemispheres
228.1
2341
Male, age 80, both hemispheres
207.0
2135
Female, age 91, both hemispheres
178.6
Principal sensory trigeminal nucleus nTPM: 365.6
2158
Male, age 61, both hemispheres
540.6
2008
Male, age 80, left hemisphere
388.5
2324
Male, age 76, both hemispheres
341.0
2367
Female, age 91, left hemisphere
192.3
Reticular pontine nucleus, caudal nTPM: 283.4
2092
Male, age 76, both hemispheres
379.5
2332
Male, age 80, right hemisphere
335.8
2559
Male, age 74, both hemispheres
216.6
2457
Female, age 91, both hemispheres
201.6
Reticular pontine nucleus, oral nTPM: 315.9
2012
Female, age 85, both hemispheres
397.1
1939
Male, age 80, both hemispheres
340.3
2167
Male, age 76, both hemispheres
329.8
2361
Male, age 74, both hemispheres
291.6
2366
Female, age 91, both hemispheres
220.9
Reticulotegmental nucleus nTPM: 294.5
2325
Male, age 76, both hemispheres
344.7
2452
Male, age 74, both hemispheres
293.8
2333
Male, age 80, both hemispheres
291.9
2322
Female, age 91, both hemispheres
247.6
Spinal trigeminal nucleus, oral nTPM: 315.4
2737
Female, age 85, both hemispheres
383.8
2164
Male, age 80, both hemispheres
308.3
1978
Male, age 76, both hemispheres
254.0
Subcoeruleus area nTPM: 301.7
2323
Female, age 91, left hemisphere
347.7
1958
Male, age 80, both hemispheres
334.3
2089
Male, age 76, left hemisphere
290.0
2451
Male, age 74, both hemispheres
282.2
2369
Female, age 85, left hemisphere
254.4
Superior olive nTPM: 325.7
1875
Female, age 85, both hemispheres
443.5
2364
Male, age 74, right hemisphere
362.1
2020
Male, age 76, both hemispheres
332.3
2329
Male, age 80, right hemisphere
290.6
2561
Female, age 91, both hemispheres
200.1
Ventral periolivary nuclei nTPM: 353.0
2130
Female, age 85, both hemispheres
476.7
2165
Male, age 80, both hemispheres
407.2
2023
Male, age 76, both hemispheres
304.2
2794
Female, age 91, left hemisphere
224.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 303.0
2840
Female, age 85, both hemispheres
372.1
1959
Male, age 76, both hemispheres
344.8
2449
Male, age 74, both hemispheres
339.9
2161
Male, age 80, both hemispheres
280.3
2359
Male, age 61, both hemispheres
273.5
2456
Female, age 91, both hemispheres
207.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
444.2
Pig sample
Sample description
nTPM
Pons nTPM: 444.2
Samples: 4
Max nTPM: 556.6
Min nTPM: 297.0
Sample A
Female
556.6
Sample B
Female
297.0
Sample C
Male
391.0
Sample D
Male
532.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
