HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:7.2 nTPM
HPA Brain:11.5 nTPM
GTEx:7.2 nTPM
FANTOM5:7.8 Scaled Tags Per Million
Pig:8.6 nTPM
Mouse:10.3 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039723
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.5
2621 Female, age 67, right hemisphere 14.6
2529 Female, age 94, left hemisphere 13.4
1911 Female, age 85, right hemisphere 10.9
1855 Male, age 76, left hemisphere 10.5
2148 Female, age 91, left hemisphere 10.0
1898 Male, age 80, left hemisphere 9.7
Dentate gyrus
nTPM: 10.0
2530 Female, age 94, left hemisphere 11.9
2528 Male, age 74, both hemispheres 11.7
2246 Female, age 85, both hemispheres 9.9
2010 Male, age 76, both hemispheres 9.3
2531 Female, age 67, both hemispheres 8.6
1927 Female, age 91, both hemispheres 8.3
Entorhinal gyrus
nTPM: 9.8
2117 Female, age 91, right hemisphere 14.6
1787 Male, age 76, left hemisphere 10.3
2764 Male, age 80, right hemisphere 8.9
1938 Female, age 85, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.6
2613 Female, age 94, left hemisphere 7.5
Hippocampus, CA1
nTPM: 8.6
2527 Male, age 74, both hemispheres 11.7
2082 Female, age 91, right hemisphere 9.8
1873 Female, age 85, both hemispheres 8.4
2045 Male, age 76, both hemispheres 8.1
2749 Male, age 80, left hemisphere 4.8
Hippocampus, CA2
nTPM: 10.1
1940 Female, age 85, left hemisphere 12.9
2113 Female, age 91, right hemisphere 11.7
2437 Female, age 94, left hemisphere 10.1
2249 Male, age 74, both hemispheres 9.7
1963 Male, age 80, left hemisphere 8.7
1892 Male, age 76, both hemispheres 7.5
Hippocampus, CA3
nTPM: 9.1
2436 Male, age 74, both hemispheres 10.8
1867 Male, age 76, both hemispheres 10.2
1891 Female, age 85, both hemispheres 9.8
2861 Female, age 67, both hemispheres 9.8
2620 Female, age 94, left hemisphere 8.0
2137 Male, age 80, left hemisphere 5.8
Parahippocampal cortex
nTPM: 10.4
2018 Male, age 76, both hemispheres 15.1
2250 Female, age 67, right hemisphere 14.1
2692 Male, age 74, both hemispheres 11.5
2622 Female, age 67, right hemisphere 10.7
2245 Female, age 91, both hemispheres 10.0
1990 Female, age 91, right hemisphere 9.8
1933 Female, age 85, both hemispheres 9.4
2532 Female, age 72, left hemisphere 8.6
2693 Female, age 94, both hemispheres 8.0
1850 Male, age 80, both hemispheres 6.9
Perirhinal gyrus
nTPM: 7.9
2521 Female, age 94, right hemisphere 9.4
2848 Male, age 76, right hemisphere 8.0
1847 Female, age 91, left hemisphere 7.9
1794 Male, age 80, right hemisphere 7.4
1841 Female, age 85, right hemisphere 6.8
Subiculum
nTPM: 11.0
2619 Male, age 74, both hemispheres 13.2
2042 Male, age 76, both hemispheres 13.1
2729 Female, age 91, right hemisphere 12.3
2438 Female, age 94, left hemisphere 10.7
1901 Male, age 80, both hemispheres 8.6
1977 Female, age 85, both hemispheres 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.2
Samples: 197

Max nTPM: 25.1
Min nTPM: 2.0
Std nTPM: 2.9
Median nTPM: 6.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 16.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 15.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 15.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 14.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 14.8
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 13.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 13.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 12.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 12.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.8
FF:10153-102I9 76 years, female 13.5
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.6
Pig sample Sample description nTPM
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 9.5
Min nTPM: 7.3
Sample A Female 9.5
Sample B Female 7.3
Sample C Male 8.6
Sample D Male 9.1
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.5
Sample A Female 7.7
Sample B Female 6.5
Sample C Male 9.5
Sample D Male 6.8
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.4
Sample A Female 7.9
Sample B Female 8.0
Sample C Male 7.5
Sample D Male 5.4
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.6
Sample A Female 6.6
Sample B Female 7.0
Sample C Male 10.1
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.8
Sample A Male 10.2
Sample B Male 9.8
Sample C Female 11.1
Sample D Female 10.4
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.0
Sample A Male 9.4
Sample B Male 8.4
Sample C Female 8.0
Sample D Female 10.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68341722 Antisense, RP_041207_02_A10, Mouse strain C57BL/6J (56 days, male) 1.5
69531115 Antisense, RP_050426_01_C10, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org