HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:95.5 nTPM
HPA Brain:68.7 nTPM
GTEx:95.5 nTPM
FANTOM5:109.1 Scaled Tags Per Million
Pig:92.5 nTPM
Mouse:170.3 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017980Antibody CAB010455
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.7
Sample id Sample description nTPM
Hippocampus
nTPM: 68.7
2529 Female, age 94, left hemisphere 80.4
1898 Male, age 80, left hemisphere 78.6
1855 Male, age 76, left hemisphere 72.0
1911 Female, age 85, right hemisphere 62.0
2621 Female, age 67, right hemisphere 59.9
2148 Female, age 91, left hemisphere 59.3
Dentate gyrus
nTPM: 62.5
2530 Female, age 94, left hemisphere 76.5
2010 Male, age 76, both hemispheres 76.2
2528 Male, age 74, both hemispheres 66.6
2246 Female, age 85, both hemispheres 54.0
1927 Female, age 91, both hemispheres 51.8
2531 Female, age 67, both hemispheres 49.8
Entorhinal gyrus
nTPM: 61.3
2117 Female, age 91, right hemisphere 75.5
2764 Male, age 80, right hemisphere 64.7
1787 Male, age 76, left hemisphere 64.2
1938 Female, age 85, left hemisphere 62.9
2686 Male, age 75, right hemisphere 57.3
2613 Female, age 94, left hemisphere 43.2
Hippocampus, CA1
nTPM: 63.2
2527 Male, age 74, both hemispheres 82.9
2082 Female, age 91, right hemisphere 61.2
1873 Female, age 85, both hemispheres 60.9
2749 Male, age 80, left hemisphere 57.0
2045 Male, age 76, both hemispheres 54.0
Hippocampus, CA2
nTPM: 65.3
2249 Male, age 74, both hemispheres 79.9
1963 Male, age 80, left hemisphere 72.4
1940 Female, age 85, left hemisphere 65.7
2113 Female, age 91, right hemisphere 64.4
2437 Female, age 94, left hemisphere 58.4
1892 Male, age 76, both hemispheres 50.9
Hippocampus, CA3
nTPM: 61.6
2861 Female, age 67, both hemispheres 73.7
2436 Male, age 74, both hemispheres 65.4
1867 Male, age 76, both hemispheres 61.7
1891 Female, age 85, both hemispheres 58.2
2620 Female, age 94, left hemisphere 57.7
2137 Male, age 80, left hemisphere 52.7
Parahippocampal cortex
nTPM: 59.4
2018 Male, age 76, both hemispheres 83.7
1933 Female, age 85, both hemispheres 65.0
2245 Female, age 91, both hemispheres 61.6
2250 Female, age 67, right hemisphere 60.6
2692 Male, age 74, both hemispheres 60.4
1990 Female, age 91, right hemisphere 59.4
1850 Male, age 80, both hemispheres 58.2
2622 Female, age 67, right hemisphere 56.0
2532 Female, age 72, left hemisphere 50.7
2693 Female, age 94, both hemispheres 38.1
Perirhinal gyrus
nTPM: 56.2
1794 Male, age 80, right hemisphere 64.5
1841 Female, age 85, right hemisphere 61.7
1847 Female, age 91, left hemisphere 59.7
2848 Male, age 76, right hemisphere 51.3
2521 Female, age 94, right hemisphere 44.0
Subiculum
nTPM: 59.3
2042 Male, age 76, both hemispheres 76.5
2619 Male, age 74, both hemispheres 67.9
1977 Female, age 85, both hemispheres 58.6
2729 Female, age 91, right hemisphere 57.8
1901 Male, age 80, both hemispheres 54.3
2438 Female, age 94, left hemisphere 40.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.5
Samples: 197

Max nTPM: 431.5
Min nTPM: 47.5
Std nTPM: 38.3
Median nTPM: 88.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 431.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 254.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 226.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 214.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 169.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 169.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 168.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 161.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 159.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 153.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 148.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.1
FF:10153-102I9 76 years, female 126.9
FF:10169-103B7 60 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.5
Pig sample Sample description nTPM
Subiculum
nTPM: 88.9
Samples: 4

Max nTPM: 114.3
Min nTPM: 73.2
Sample A Female 114.3
Sample B Female 79.4
Sample C Male 88.8
Sample D Male 73.2
Dorsal hippocampus
nTPM: 77.3
Samples: 4

Max nTPM: 92.0
Min nTPM: 62.5
Sample A Female 92.0
Sample B Female 75.8
Sample C Male 79.0
Sample D Male 62.5
Entorhinal cortex
nTPM: 83.9
Samples: 4

Max nTPM: 96.2
Min nTPM: 64.0
Sample A Female 89.6
Sample B Female 85.8
Sample C Male 96.2
Sample D Male 64.0
Ventral hippocampus
nTPM: 92.6
Samples: 4

Max nTPM: 129.1
Min nTPM: 69.8
Sample A Female 98.6
Sample B Female 72.7
Sample C Male 129.1
Sample D Male 69.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 170.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 170.3
Samples: 4

Max nTPM: 196.6
Min nTPM: 153.1
Sample A Male 153.1
Sample B Male 157.0
Sample C Female 174.4
Sample D Female 196.6
Hippocampal formation
nTPM: 157.2
Samples: 4

Max nTPM: 168.8
Min nTPM: 147.7
Sample A Male 163.5
Sample B Male 148.9
Sample C Female 147.7
Sample D Female 168.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
69873971 Antisense, RP_050512_02_D06, Mouse strain C57BL/6J (56 days, male) 6.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org