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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
185.5
nTPM
FANTOM5:
250.4
Scaled Tags Per Million
Pig:
166.9
nTPM
Allen mouse:
4.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
185.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 161.6
2301
Female, age 85, both hemispheres
168.2
1984
Male, age 76, both hemispheres
164.5
2090
Male, age 80, both hemispheres
160.1
2188
Female, age 91, both hemispheres
153.5
Dorsal cochlear nucleus nTPM: 179.4
2802
Male, age 74, right hemisphere
203.2
2187
Female, age 91, both hemispheres
179.8
2378
Male, age 80, both hemispheres
178.6
2370
Male, age 61, both hemispheres
168.0
2058
Male, age 76, both hemispheres
167.5
Dorsal tegmental nucleus nTPM: 182.4
2358
Male, age 61, both hemispheres
228.1
2326
Male, age 74, both hemispheres
190.9
2083
Male, age 80, both hemispheres
166.8
1936
Male, age 76, left hemisphere
143.6
Dorsolateral tegmental area nTPM: 185.5
2360
Male, age 74, both hemispheres
237.9
2337
Male, age 61, both hemispheres
198.2
2654
Male, age 80, both hemispheres
174.1
2141
Male, age 76, both hemispheres
160.1
2751
Female, age 85, both hemispheres
157.3
Kolliker-Fuse nucleus nTPM: 172.5
2315
Male, age 76, right hemisphere
207.8
2163
Male, age 80, both hemispheres
159.8
2793
Female, age 91, left hemisphere
149.9
Lateral lemniscal nuclei nTPM: 130.6
2320
Female, age 91, left hemisphere
139.7
2453
Male, age 74, right hemisphere
134.2
2746
Female, age 85, left hemisphere
130.6
2036
Male, age 80, both hemispheres
126.1
2169
Male, age 76, both hemispheres
122.6
Lateral parabrachial nucleus nTPM: 156.4
2013
Male, age 80, both hemispheres
164.7
2792
Male, age 76, both hemispheres
163.8
2139
Female, age 85, right hemisphere
161.5
2790
Male, age 61, both hemispheres
135.5
Lateral vestibular nucleus nTPM: 153.0
2311
Male, age 80, both hemispheres
175.1
2184
Male, age 76, both hemispheres
130.8
Locus coeruleus nTPM: 165.9
2123
Female, age 91, both hemispheres
197.4
2014
Male, age 55, unknown
176.9
1980
Male, age 76, both hemispheres
168.8
2317
Female, age 72, unknown
162.9
2720
Male, age 74, both hemispheres
156.2
2162
Male, age 80, both hemispheres
154.1
2788
Male, age 74, unknown
145.0
Medial parabrachial nucleus nTPM: 163.8
2463
Female, age 85, right hemisphere
201.1
2170
Female, age 91, both hemispheres
185.7
2156
Male, age 61, both hemispheres
153.7
2786
Male, age 76, both hemispheres
140.0
2854
Male, age 80, both hemispheres
138.3
Medial periolivary nuclei nTPM: 140.9
2791
Male, age 74, right hemisphere
168.0
2063
Male, age 76, both hemispheres
145.0
2171
Female, age 85, both hemispheres
136.9
2081
Male, age 80, both hemispheres
131.4
2458
Female, age 91, both hemispheres
123.0
Motor facial nucleus nTPM: 146.2
2795
Female, age 91, both hemispheres
170.0
2365
Male, age 74, right hemisphere
165.0
2126
Male, age 61, both hemispheres
152.3
2062
Male, age 76, both hemispheres
146.0
2697
Female, age 85, both hemispheres
133.6
2327
Male, age 80, both hemispheres
110.5
Motor trigeminal nucleus nTPM: 132.7
2560
Male, age 74, both hemispheres
148.5
2335
Male, age 61, both hemispheres
148.3
2309
Male, age 76, both hemispheres
134.0
2321
Female, age 91, both hemispheres
127.1
2079
Male, age 80, both hemispheres
105.6
Nuclei of the trapezoid body nTPM: 133.8
2368
Female, age 91, both hemispheres
150.6
1983
Male, age 76, both hemispheres
141.6
2166
Male, age 80, both hemispheres
126.9
2159
Male, age 61, both hemispheres
125.0
2735
Female, age 85, both hemispheres
125.0
Nucleus raphe magnus nTPM: 132.5
2455
Male, age 74, both hemispheres
152.9
2051
Male, age 76, both hemispheres
139.9
2459
Female, age 91, both hemispheres
135.3
2328
Male, age 80, both hemispheres
128.7
2160
Male, age 61, both hemispheres
120.1
2172
Female, age 85, both hemispheres
117.8
Paramedian reticular nucleus nTPM: 152.2
2057
Male, age 80, both hemispheres
165.8
2313
Male, age 61, both hemispheres
162.0
2050
Female, age 85, both hemispheres
146.7
2052
Male, age 76, both hemispheres
134.2
Pedunculopontine tegmental nucleus nTPM: 180.6
1921
Female, age 85, both hemispheres
187.7
2334
Male, age 80, both hemispheres
177.6
2338
Male, age 61, both hemispheres
176.5
Pontine nuclei nTPM: 140.4
2454
Male, age 74, left hemisphere
157.7
2319
Female, age 91, both hemispheres
151.0
1863
Male, age 55, unknown
146.5
2109
Female, age 72, unknown
142.6
1968
Male, age 76, left hemisphere
140.5
2787
Female, age 85, both hemispheres
138.0
2727
Male, age 61, right hemisphere
124.6
2115
Male, age 80, left hemisphere
122.4
Pontine raphe nucleus nTPM: 138.2
2853
Male, age 76, midline
148.2
2122
Female, age 85, midline
128.2
Posteroventral cochlear nucleus nTPM: 160.9
2070
Male, age 76, both hemispheres
175.4
2371
Male, age 61, both hemispheres
166.5
2752
Female, age 85, both hemispheres
164.1
2135
Female, age 91, both hemispheres
151.2
2341
Male, age 80, both hemispheres
147.3
Principal sensory trigeminal nucleus nTPM: 125.3
2324
Male, age 76, both hemispheres
142.4
2367
Female, age 91, left hemisphere
138.1
2158
Male, age 61, both hemispheres
114.1
2008
Male, age 80, left hemisphere
106.5
Reticular pontine nucleus, caudal nTPM: 126.4
2559
Male, age 74, both hemispheres
146.5
2092
Male, age 76, both hemispheres
139.8
2457
Female, age 91, both hemispheres
119.3
2332
Male, age 80, right hemisphere
100.2
Reticular pontine nucleus, oral nTPM: 152.2
1939
Male, age 80, both hemispheres
170.2
2167
Male, age 76, both hemispheres
157.6
2366
Female, age 91, both hemispheres
153.6
2012
Female, age 85, both hemispheres
143.0
2361
Male, age 74, both hemispheres
136.8
Reticulotegmental nucleus nTPM: 148.0
2322
Female, age 91, both hemispheres
167.9
2452
Male, age 74, both hemispheres
165.5
2333
Male, age 80, both hemispheres
141.9
2325
Male, age 76, both hemispheres
116.7
Spinal trigeminal nucleus, oral nTPM: 154.5
2737
Female, age 85, both hemispheres
163.8
1978
Male, age 76, both hemispheres
156.6
2164
Male, age 80, both hemispheres
143.2
Subcoeruleus area nTPM: 153.4
2451
Male, age 74, both hemispheres
174.8
2323
Female, age 91, left hemisphere
163.1
2369
Female, age 85, left hemisphere
159.5
1958
Male, age 80, both hemispheres
153.9
2089
Male, age 76, left hemisphere
115.6
Superior olive nTPM: 138.8
2364
Male, age 74, right hemisphere
175.4
2020
Male, age 76, both hemispheres
140.3
2561
Female, age 91, both hemispheres
126.8
2329
Male, age 80, right hemisphere
126.1
1875
Female, age 85, both hemispheres
125.1
Ventral periolivary nuclei nTPM: 136.7
2130
Female, age 85, both hemispheres
155.3
2023
Male, age 76, both hemispheres
153.9
2165
Male, age 80, both hemispheres
120.0
2794
Female, age 91, left hemisphere
117.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 152.6
2359
Male, age 61, both hemispheres
178.7
2456
Female, age 91, both hemispheres
160.2
2840
Female, age 85, both hemispheres
152.1
2449
Male, age 74, both hemispheres
143.2
1959
Male, age 76, both hemispheres
141.8
2161
Male, age 80, both hemispheres
139.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
166.9
Pig sample
Sample description
nTPM
Pons nTPM: 166.9
Samples: 4
Max nTPM: 252.5
Min nTPM: 123.6
Sample A
Female
252.5
Sample B
Female
123.6
Sample C
Male
155.0
Sample D
Male
136.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
