HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.3 nTPM
HPA Brain:63.3 nTPM
GTEx:25.3 nTPM
FANTOM5:106.1 Scaled Tags Per Million
Pig:35.8 nTPM
Mouse:12.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000251
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.3
Sample id Sample description nTPM
Hippocampus
nTPM: 56.1
1911 Female, age 85, right hemisphere 63.3
1855 Male, age 76, left hemisphere 57.1
2148 Female, age 91, left hemisphere 55.1
2529 Female, age 94, left hemisphere 54.4
2621 Female, age 67, right hemisphere 54.0
1898 Male, age 80, left hemisphere 52.9
Dentate gyrus
nTPM: 57.3
2010 Male, age 76, both hemispheres 72.6
2528 Male, age 74, both hemispheres 56.2
2246 Female, age 85, both hemispheres 55.7
2530 Female, age 94, left hemisphere 55.1
1927 Female, age 91, both hemispheres 55.0
2531 Female, age 67, both hemispheres 49.1
Entorhinal gyrus
nTPM: 59.1
2117 Female, age 91, right hemisphere 69.3
2686 Male, age 75, right hemisphere 59.3
1787 Male, age 76, left hemisphere 58.5
2764 Male, age 80, right hemisphere 58.2
2613 Female, age 94, left hemisphere 56.4
1938 Female, age 85, left hemisphere 52.8
Hippocampus, CA1
nTPM: 55.9
2082 Female, age 91, right hemisphere 58.3
2749 Male, age 80, left hemisphere 57.0
2045 Male, age 76, both hemispheres 55.3
1873 Female, age 85, both hemispheres 54.9
2527 Male, age 74, both hemispheres 54.3
Hippocampus, CA2
nTPM: 56.5
2113 Female, age 91, right hemisphere 61.1
1963 Male, age 80, left hemisphere 59.3
2249 Male, age 74, both hemispheres 56.8
1892 Male, age 76, both hemispheres 54.8
2437 Female, age 94, left hemisphere 54.2
1940 Female, age 85, left hemisphere 52.6
Hippocampus, CA3
nTPM: 53.2
1891 Female, age 85, both hemispheres 65.9
2137 Male, age 80, left hemisphere 57.6
1867 Male, age 76, both hemispheres 56.9
2620 Female, age 94, left hemisphere 50.5
2436 Male, age 74, both hemispheres 47.2
2861 Female, age 67, both hemispheres 41.1
Parahippocampal cortex
nTPM: 58.5
2018 Male, age 76, both hemispheres 68.5
2692 Male, age 74, both hemispheres 65.6
2532 Female, age 72, left hemisphere 64.5
2693 Female, age 94, both hemispheres 61.6
1990 Female, age 91, right hemisphere 60.2
2245 Female, age 91, both hemispheres 58.4
1850 Male, age 80, both hemispheres 58.0
1933 Female, age 85, both hemispheres 53.8
2250 Female, age 67, right hemisphere 50.5
2622 Female, age 67, right hemisphere 43.5
Perirhinal gyrus
nTPM: 52.7
2521 Female, age 94, right hemisphere 56.1
1794 Male, age 80, right hemisphere 54.2
2848 Male, age 76, right hemisphere 52.2
1841 Female, age 85, right hemisphere 50.7
1847 Female, age 91, left hemisphere 50.5
Subiculum
nTPM: 63.3
2042 Male, age 76, both hemispheres 78.7
1901 Male, age 80, both hemispheres 68.9
1977 Female, age 85, both hemispheres 62.2
2619 Male, age 74, both hemispheres 58.1
2729 Female, age 91, right hemisphere 57.8
2438 Female, age 94, left hemisphere 54.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 78.5
Min nTPM: 12.8
Std nTPM: 9.1
Median nTPM: 23.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 78.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 54.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 49.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 48.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 45.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 45.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 43.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 43.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 42.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.1
FF:10169-103B7 60 years, female 110.0
FF:10153-102I9 76 years, female 102.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.8
Pig sample Sample description nTPM
Subiculum
nTPM: 34.2
Samples: 4

Max nTPM: 35.1
Min nTPM: 33.2
Sample A Female 33.6
Sample B Female 34.8
Sample C Male 33.2
Sample D Male 35.1
Dorsal hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 45.1
Min nTPM: 28.1
Sample A Female 35.9
Sample B Female 34.1
Sample C Male 45.1
Sample D Male 28.1
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 29.2
Min nTPM: 26.0
Sample A Female 26.6
Sample B Female 27.3
Sample C Male 29.2
Sample D Male 26.0
Ventral hippocampus
nTPM: 33.2
Samples: 4

Max nTPM: 35.2
Min nTPM: 31.1
Sample A Female 35.2
Sample B Female 31.1
Sample C Male 31.2
Sample D Male 35.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 14.3
Min nTPM: 11.3
Sample A Male 14.3
Sample B Male 13.5
Sample C Female 11.3
Sample D Female 12.2
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.7
Sample A Male 11.7
Sample B Male 12.4
Sample C Female 14.0
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69262324 Antisense, RP_050303_02_A05, Mouse strain C57BL/6J (56 days, male) 0.2

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