HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:27.4 nTPM
HPA Brain:52.5 nTPM
GTEx:27.4 nTPM
FANTOM5:146.5 Scaled Tags Per Million
Pig:40.9 nTPM
Mouse:8.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027815
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.5
Sample id Sample description nTPM
Hippocampus
nTPM: 50.5
2529 Female, age 94, left hemisphere 60.1
1898 Male, age 80, left hemisphere 55.5
1911 Female, age 85, right hemisphere 52.9
2621 Female, age 67, right hemisphere 47.4
2148 Female, age 91, left hemisphere 46.0
1855 Male, age 76, left hemisphere 41.0
Dentate gyrus
nTPM: 50.4
2010 Male, age 76, both hemispheres 64.6
2530 Female, age 94, left hemisphere 59.4
2528 Male, age 74, both hemispheres 53.2
2531 Female, age 67, both hemispheres 43.8
1927 Female, age 91, both hemispheres 43.3
2246 Female, age 85, both hemispheres 38.2
Entorhinal gyrus
nTPM: 52.5
2117 Female, age 91, right hemisphere 70.4
2764 Male, age 80, right hemisphere 57.8
2613 Female, age 94, left hemisphere 50.1
1938 Female, age 85, left hemisphere 49.7
1787 Male, age 76, left hemisphere 47.4
2686 Male, age 75, right hemisphere 39.3
Hippocampus, CA1
nTPM: 46.3
2749 Male, age 80, left hemisphere 60.2
2527 Male, age 74, both hemispheres 47.4
1873 Female, age 85, both hemispheres 46.8
2082 Female, age 91, right hemisphere 41.4
2045 Male, age 76, both hemispheres 35.8
Hippocampus, CA2
nTPM: 51.5
1963 Male, age 80, left hemisphere 70.5
2249 Male, age 74, both hemispheres 60.7
1940 Female, age 85, left hemisphere 50.0
2113 Female, age 91, right hemisphere 46.4
2437 Female, age 94, left hemisphere 46.1
1892 Male, age 76, both hemispheres 35.2
Hippocampus, CA3
nTPM: 46.5
1891 Female, age 85, both hemispheres 50.2
2436 Male, age 74, both hemispheres 49.7
2620 Female, age 94, left hemisphere 46.1
1867 Male, age 76, both hemispheres 45.3
2861 Female, age 67, both hemispheres 44.8
2137 Male, age 80, left hemisphere 43.2
Parahippocampal cortex
nTPM: 44.0
1990 Female, age 91, right hemisphere 60.0
2018 Male, age 76, both hemispheres 48.5
2692 Male, age 74, both hemispheres 44.5
2245 Female, age 91, both hemispheres 44.4
2250 Female, age 67, right hemisphere 43.6
1850 Male, age 80, both hemispheres 42.8
1933 Female, age 85, both hemispheres 42.3
2532 Female, age 72, left hemisphere 42.3
2693 Female, age 94, both hemispheres 36.3
2622 Female, age 67, right hemisphere 35.1
Perirhinal gyrus
nTPM: 38.4
1847 Female, age 91, left hemisphere 40.3
2521 Female, age 94, right hemisphere 40.3
1841 Female, age 85, right hemisphere 38.5
1794 Male, age 80, right hemisphere 38.3
2848 Male, age 76, right hemisphere 34.7
Subiculum
nTPM: 52.4
2042 Male, age 76, both hemispheres 66.3
1901 Male, age 80, both hemispheres 55.6
1977 Female, age 85, both hemispheres 53.9
2729 Female, age 91, right hemisphere 51.0
2619 Male, age 74, both hemispheres 47.4
2438 Female, age 94, left hemisphere 40.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.4
Samples: 197

Max nTPM: 78.4
Min nTPM: 14.7
Std nTPM: 9.6
Median nTPM: 25.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 78.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 68.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 61.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 56.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 56.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 55.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 53.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 52.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 47.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 45.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 43.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.5
FF:10153-102I9 76 years, female 179.9
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.9
Pig sample Sample description nTPM
Subiculum
nTPM: 40.9
Samples: 4

Max nTPM: 49.0
Min nTPM: 36.7
Sample A Female 49.0
Sample B Female 38.7
Sample C Male 39.3
Sample D Male 36.7
Dorsal hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 46.9
Min nTPM: 29.4
Sample A Female 46.9
Sample B Female 36.6
Sample C Male 41.9
Sample D Male 29.4
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 43.9
Min nTPM: 36.8
Sample A Female 43.9
Sample B Female 40.6
Sample C Male 42.1
Sample D Male 36.8
Ventral hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 44.7
Min nTPM: 32.7
Sample A Female 40.3
Sample B Female 32.7
Sample C Male 44.7
Sample D Male 38.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.9
Sample A Male 9.3
Sample B Male 10.0
Sample C Female 7.9
Sample D Female 8.5
Hippocampal formation
nTPM: 8.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 8.1
Sample C Female 8.1
Sample D Female 8.3

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