HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:18.5 nTPM
HPA Brain:17.2 nTPM
GTEx:18.5 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:6.8 nTPM
Mouse:9.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050683
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.2
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
2529 Female, age 94, left hemisphere 19.8
1911 Female, age 85, right hemisphere 14.2
1898 Male, age 80, left hemisphere 13.6
2148 Female, age 91, left hemisphere 13.5
2621 Female, age 67, right hemisphere 13.5
1855 Male, age 76, left hemisphere 7.4
Dentate gyrus
nTPM: 13.0
2530 Female, age 94, left hemisphere 17.0
2528 Male, age 74, both hemispheres 15.9
2246 Female, age 85, both hemispheres 12.8
2531 Female, age 67, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.0
1927 Female, age 91, both hemispheres 9.9
Entorhinal gyrus
nTPM: 12.7
1787 Male, age 76, left hemisphere 16.9
2117 Female, age 91, right hemisphere 15.6
1938 Female, age 85, left hemisphere 12.7
2764 Male, age 80, right hemisphere 11.4
2686 Male, age 75, right hemisphere 10.4
2613 Female, age 94, left hemisphere 9.3
Hippocampus, CA1
nTPM: 12.2
2082 Female, age 91, right hemisphere 18.3
2527 Male, age 74, both hemispheres 14.3
1873 Female, age 85, both hemispheres 11.6
2045 Male, age 76, both hemispheres 10.3
2749 Male, age 80, left hemisphere 6.7
Hippocampus, CA2
nTPM: 17.2
2249 Male, age 74, both hemispheres 28.1
1940 Female, age 85, left hemisphere 23.9
2113 Female, age 91, right hemisphere 16.2
2437 Female, age 94, left hemisphere 13.8
1963 Male, age 80, left hemisphere 12.2
1892 Male, age 76, both hemispheres 9.2
Hippocampus, CA3
nTPM: 13.6
2436 Male, age 74, both hemispheres 24.0
2861 Female, age 67, both hemispheres 13.6
1891 Female, age 85, both hemispheres 13.1
2620 Female, age 94, left hemisphere 13.0
1867 Male, age 76, both hemispheres 11.9
2137 Male, age 80, left hemisphere 5.9
Parahippocampal cortex
nTPM: 12.2
2532 Female, age 72, left hemisphere 14.1
2622 Female, age 67, right hemisphere 14.1
2692 Male, age 74, both hemispheres 13.1
2250 Female, age 67, right hemisphere 12.5
1990 Female, age 91, right hemisphere 12.2
2018 Male, age 76, both hemispheres 12.1
2245 Female, age 91, both hemispheres 12.0
1850 Male, age 80, both hemispheres 11.8
1933 Female, age 85, both hemispheres 10.6
2693 Female, age 94, both hemispheres 10.1
Perirhinal gyrus
nTPM: 11.8
1794 Male, age 80, right hemisphere 15.1
2848 Male, age 76, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.2
2521 Female, age 94, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.2
Subiculum
nTPM: 13.7
2438 Female, age 94, left hemisphere 20.7
2619 Male, age 74, both hemispheres 15.8
2729 Female, age 91, right hemisphere 13.6
1977 Female, age 85, both hemispheres 12.2
1901 Male, age 80, both hemispheres 11.2
2042 Male, age 76, both hemispheres 8.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 48.7
Min nTPM: 5.7
Std nTPM: 7.0
Median nTPM: 17.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 48.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 43.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 38.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 36.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 35.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 34.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 33.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 33.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 32.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 32.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 32.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10153-102I9 76 years, female 6.7
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.8
Pig sample Sample description nTPM
Subiculum
nTPM: 6.8
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.3
Sample A Female 7.7
Sample B Female 6.3
Sample C Male 6.7
Sample D Male 6.6
Dorsal hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.3
Sample A Female 6.2
Sample B Female 4.4
Sample C Male 6.3
Sample D Male 4.3
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 8.2
Min nTPM: 3.4
Sample A Female 8.2
Sample B Female 5.6
Sample C Male 6.2
Sample D Male 3.4
Ventral hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 8.5
Min nTPM: 4.1
Sample A Female 7.0
Sample B Female 5.1
Sample C Male 8.5
Sample D Male 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.2
Sample A Male 4.6
Sample B Male 4.2
Sample C Female 6.8
Sample D Female 5.3
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 11.7
Min nTPM: 6.5
Sample A Male 6.5
Sample B Male 7.4
Sample C Female 10.3
Sample D Female 11.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73817984 Antisense, RP_051214_01_A09, Mouse strain C57BL/6J (56 days, male) 0.1
686197 Antisense, RP_040916_01_A05, Mouse strain C57BL/6J (56 days, male) 0.0

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