HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:55.4 nTPM
HPA Brain:51.8 nTPM
GTEx:55.4 nTPM
FANTOM5:90.1 Scaled Tags Per Million
Pig:38.9 nTPM
Mouse:54.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019717
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
1855 Male, age 76, left hemisphere 57.2
1898 Male, age 80, left hemisphere 56.7
2148 Female, age 91, left hemisphere 53.5
1911 Female, age 85, right hemisphere 50.6
2529 Female, age 94, left hemisphere 49.6
2621 Female, age 67, right hemisphere 43.3
Dentate gyrus
nTPM: 42.0
2246 Female, age 85, both hemispheres 49.6
2010 Male, age 76, both hemispheres 47.9
2528 Male, age 74, both hemispheres 44.1
1927 Female, age 91, both hemispheres 41.9
2530 Female, age 94, left hemisphere 40.7
2531 Female, age 67, both hemispheres 27.6
Entorhinal gyrus
nTPM: 45.5
2117 Female, age 91, right hemisphere 66.7
1938 Female, age 85, left hemisphere 52.0
2686 Male, age 75, right hemisphere 44.7
1787 Male, age 76, left hemisphere 43.5
2764 Male, age 80, right hemisphere 33.5
2613 Female, age 94, left hemisphere 32.8
Hippocampus, CA1
nTPM: 46.1
2527 Male, age 74, both hemispheres 54.7
1873 Female, age 85, both hemispheres 49.8
2082 Female, age 91, right hemisphere 48.3
2045 Male, age 76, both hemispheres 39.7
2749 Male, age 80, left hemisphere 38.0
Hippocampus, CA2
nTPM: 49.4
1940 Female, age 85, left hemisphere 56.4
2113 Female, age 91, right hemisphere 54.6
1892 Male, age 76, both hemispheres 49.5
1963 Male, age 80, left hemisphere 45.9
2249 Male, age 74, both hemispheres 45.3
2437 Female, age 94, left hemisphere 44.5
Hippocampus, CA3
nTPM: 38.3
1867 Male, age 76, both hemispheres 48.9
1891 Female, age 85, both hemispheres 45.1
2436 Male, age 74, both hemispheres 41.2
2861 Female, age 67, both hemispheres 39.0
2137 Male, age 80, left hemisphere 31.5
2620 Female, age 94, left hemisphere 24.1
Parahippocampal cortex
nTPM: 50.1
2250 Female, age 67, right hemisphere 64.5
2692 Male, age 74, both hemispheres 63.1
2622 Female, age 67, right hemisphere 57.5
1933 Female, age 85, both hemispheres 52.6
2018 Male, age 76, both hemispheres 49.3
2693 Female, age 94, both hemispheres 45.5
1850 Male, age 80, both hemispheres 44.8
1990 Female, age 91, right hemisphere 44.8
2245 Female, age 91, both hemispheres 44.8
2532 Female, age 72, left hemisphere 34.2
Perirhinal gyrus
nTPM: 42.5
1847 Female, age 91, left hemisphere 47.7
1841 Female, age 85, right hemisphere 45.2
1794 Male, age 80, right hemisphere 43.5
2521 Female, age 94, right hemisphere 40.3
2848 Male, age 76, right hemisphere 35.7
Subiculum
nTPM: 49.0
2729 Female, age 91, right hemisphere 65.4
2619 Male, age 74, both hemispheres 54.5
2042 Male, age 76, both hemispheres 52.9
2438 Female, age 94, left hemisphere 44.8
1977 Female, age 85, both hemispheres 40.6
1901 Male, age 80, both hemispheres 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.4
Samples: 197

Max nTPM: 121.0
Min nTPM: 18.6
Std nTPM: 19.8
Median nTPM: 52.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 121.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 112.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 111.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 109.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 106.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 103.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 101.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 101.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 96.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 96.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 94.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.1
FF:10153-102I9 76 years, female 111.7
FF:10169-103B7 60 years, female 68.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.9
Pig sample Sample description nTPM
Subiculum
nTPM: 38.2
Samples: 4

Max nTPM: 40.8
Min nTPM: 31.6
Sample A Female 31.6
Sample B Female 40.8
Sample C Male 40.3
Sample D Male 39.9
Dorsal hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 41.5
Min nTPM: 29.7
Sample A Female 29.7
Sample B Female 34.5
Sample C Male 34.7
Sample D Male 41.5
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 42.2
Min nTPM: 36.1
Sample A Female 37.3
Sample B Female 36.1
Sample C Male 40.1
Sample D Male 42.2
Ventral hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 46.0
Min nTPM: 33.6
Sample A Female 36.2
Sample B Female 46.0
Sample C Male 33.6
Sample D Male 36.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.9
Samples: 4

Max nTPM: 57.5
Min nTPM: 40.7
Sample A Male 57.5
Sample B Male 52.1
Sample C Female 49.3
Sample D Female 40.7
Hippocampal formation
nTPM: 54.1
Samples: 4

Max nTPM: 58.3
Min nTPM: 50.0
Sample A Male 56.7
Sample B Male 50.0
Sample C Female 58.3
Sample D Female 51.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
79544800 Antisense, RP_071018_01_C09, Mouse strain C57BL/6J (56 days, male) 0.3

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