HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.1 nTPM
HPA Brain:31.5 nTPM
GTEx:15.1 nTPM
FANTOM5:171.3 Scaled Tags Per Million
Pig:135.1 nTPM
Mouse:99.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.5
Sample id Sample description nTPM
Hippocampus
nTPM: 22.7
1898 Male, age 80, left hemisphere 31.5
1855 Male, age 76, left hemisphere 23.9
2621 Female, age 67, right hemisphere 22.8
2148 Female, age 91, left hemisphere 21.2
1911 Female, age 85, right hemisphere 19.1
2529 Female, age 94, left hemisphere 17.9
Dentate gyrus
nTPM: 22.6
1927 Female, age 91, both hemispheres 31.2
2010 Male, age 76, both hemispheres 25.8
2530 Female, age 94, left hemisphere 20.1
2531 Female, age 67, both hemispheres 20.1
2246 Female, age 85, both hemispheres 19.9
2528 Male, age 74, both hemispheres 18.5
Entorhinal gyrus
nTPM: 23.5
1938 Female, age 85, left hemisphere 26.7
2764 Male, age 80, right hemisphere 26.6
2613 Female, age 94, left hemisphere 23.4
2686 Male, age 75, right hemisphere 22.9
1787 Male, age 76, left hemisphere 22.3
2117 Female, age 91, right hemisphere 18.8
Hippocampus, CA1
nTPM: 27.0
2749 Male, age 80, left hemisphere 40.2
1873 Female, age 85, both hemispheres 29.8
2082 Female, age 91, right hemisphere 22.4
2527 Male, age 74, both hemispheres 22.0
2045 Male, age 76, both hemispheres 20.6
Hippocampus, CA2
nTPM: 24.8
1892 Male, age 76, both hemispheres 36.5
1963 Male, age 80, left hemisphere 26.0
2249 Male, age 74, both hemispheres 22.9
1940 Female, age 85, left hemisphere 22.0
2437 Female, age 94, left hemisphere 21.5
2113 Female, age 91, right hemisphere 19.9
Hippocampus, CA3
nTPM: 23.6
2137 Male, age 80, left hemisphere 32.0
1867 Male, age 76, both hemispheres 27.8
2436 Male, age 74, both hemispheres 23.3
1891 Female, age 85, both hemispheres 21.4
2861 Female, age 67, both hemispheres 19.5
2620 Female, age 94, left hemisphere 17.7
Parahippocampal cortex
nTPM: 25.9
1850 Male, age 80, both hemispheres 38.0
1990 Female, age 91, right hemisphere 28.7
1933 Female, age 85, both hemispheres 28.6
2250 Female, age 67, right hemisphere 26.0
2693 Female, age 94, both hemispheres 25.8
2245 Female, age 91, both hemispheres 25.2
2018 Male, age 76, both hemispheres 24.4
2532 Female, age 72, left hemisphere 21.9
2622 Female, age 67, right hemisphere 21.1
2692 Male, age 74, both hemispheres 19.6
Perirhinal gyrus
nTPM: 31.5
1841 Female, age 85, right hemisphere 37.7
1847 Female, age 91, left hemisphere 34.9
1794 Male, age 80, right hemisphere 31.9
2848 Male, age 76, right hemisphere 27.1
2521 Female, age 94, right hemisphere 25.9
Subiculum
nTPM: 20.0
1901 Male, age 80, both hemispheres 27.1
1977 Female, age 85, both hemispheres 24.8
2619 Male, age 74, both hemispheres 19.7
2042 Male, age 76, both hemispheres 19.0
2729 Female, age 91, right hemisphere 16.8
2438 Female, age 94, left hemisphere 12.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.1
Samples: 197

Max nTPM: 44.9
Min nTPM: 5.5
Std nTPM: 6.2
Median nTPM: 14.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 33.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 31.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 30.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 28.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 28.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 26.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.3
FF:10169-103B7 60 years, female 232.6
FF:10153-102I9 76 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 135.1
Pig sample Sample description nTPM
Subiculum
nTPM: 120.7
Samples: 4

Max nTPM: 152.4
Min nTPM: 102.0
Sample A Female 152.4
Sample B Female 105.6
Sample C Male 102.0
Sample D Male 122.8
Dorsal hippocampus
nTPM: 135.1
Samples: 4

Max nTPM: 170.8
Min nTPM: 105.4
Sample A Female 170.8
Sample B Female 129.0
Sample C Male 135.2
Sample D Male 105.4
Entorhinal cortex
nTPM: 126.8
Samples: 4

Max nTPM: 142.5
Min nTPM: 112.6
Sample A Female 135.8
Sample B Female 142.5
Sample C Male 112.6
Sample D Male 116.4
Ventral hippocampus
nTPM: 114.8
Samples: 4

Max nTPM: 138.2
Min nTPM: 90.1
Sample A Female 138.2
Sample B Female 90.1
Sample C Male 101.7
Sample D Male 129.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.5
Samples: 4

Max nTPM: 112.1
Min nTPM: 85.5
Sample A Male 85.5
Sample B Male 104.4
Sample C Female 112.1
Sample D Female 96.1
Hippocampal formation
nTPM: 89.7
Samples: 4

Max nTPM: 103.7
Min nTPM: 84.3
Sample A Male 103.7
Sample B Male 84.3
Sample C Female 85.4
Sample D Female 85.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68844140 Antisense, RP_050222_01_A01, Mouse strain C57BL/6J (56 days, male) 0.2

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