HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:145.3 nTPM
HPA Brain:135.2 nTPM
GTEx:145.3 nTPM
FANTOM5:261.3 Scaled Tags Per Million
Pig:164.8 nTPM
Mouse:104.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037113
Glial cells Medium
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 135.2
Sample id Sample description nTPM
Hippocampus
nTPM: 131.4
2529 Female, age 94, left hemisphere 149.6
1898 Male, age 80, left hemisphere 146.0
2621 Female, age 67, right hemisphere 131.6
1855 Male, age 76, left hemisphere 125.6
1911 Female, age 85, right hemisphere 123.7
2148 Female, age 91, left hemisphere 112.0
Dentate gyrus
nTPM: 125.5
2010 Male, age 76, both hemispheres 146.2
2530 Female, age 94, left hemisphere 144.2
2528 Male, age 74, both hemispheres 124.0
1927 Female, age 91, both hemispheres 119.2
2246 Female, age 85, both hemispheres 116.3
2531 Female, age 67, both hemispheres 103.2
Entorhinal gyrus
nTPM: 125.1
2117 Female, age 91, right hemisphere 145.0
2764 Male, age 80, right hemisphere 139.1
1787 Male, age 76, left hemisphere 138.3
1938 Female, age 85, left hemisphere 133.6
2686 Male, age 75, right hemisphere 100.0
2613 Female, age 94, left hemisphere 94.8
Hippocampus, CA1
nTPM: 128.0
2749 Male, age 80, left hemisphere 150.6
1873 Female, age 85, both hemispheres 128.2
2527 Male, age 74, both hemispheres 125.2
2045 Male, age 76, both hemispheres 124.5
2082 Female, age 91, right hemisphere 111.4
Hippocampus, CA2
nTPM: 131.5
2249 Male, age 74, both hemispheres 153.9
1892 Male, age 76, both hemispheres 136.1
1940 Female, age 85, left hemisphere 132.6
1963 Male, age 80, left hemisphere 130.1
2437 Female, age 94, left hemisphere 122.3
2113 Female, age 91, right hemisphere 114.1
Hippocampus, CA3
nTPM: 127.6
1867 Male, age 76, both hemispheres 143.3
2436 Male, age 74, both hemispheres 136.8
2620 Female, age 94, left hemisphere 129.3
1891 Female, age 85, both hemispheres 126.3
2137 Male, age 80, left hemisphere 125.1
2861 Female, age 67, both hemispheres 105.1
Parahippocampal cortex
nTPM: 120.7
2018 Male, age 76, both hemispheres 143.6
2250 Female, age 67, right hemisphere 135.3
1850 Male, age 80, both hemispheres 132.0
1990 Female, age 91, right hemisphere 129.7
1933 Female, age 85, both hemispheres 128.2
2532 Female, age 72, left hemisphere 124.0
2245 Female, age 91, both hemispheres 120.4
2692 Male, age 74, both hemispheres 106.4
2622 Female, age 67, right hemisphere 95.3
2693 Female, age 94, both hemispheres 92.0
Perirhinal gyrus
nTPM: 126.5
1794 Male, age 80, right hemisphere 140.2
1841 Female, age 85, right hemisphere 139.8
1847 Female, age 91, left hemisphere 131.9
2848 Male, age 76, right hemisphere 116.1
2521 Female, age 94, right hemisphere 104.7
Subiculum
nTPM: 135.2
2042 Male, age 76, both hemispheres 151.7
1901 Male, age 80, both hemispheres 143.9
1977 Female, age 85, both hemispheres 137.1
2619 Male, age 74, both hemispheres 135.2
2438 Female, age 94, left hemisphere 127.3
2729 Female, age 91, right hemisphere 116.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 145.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 145.3
Samples: 197

Max nTPM: 373.7
Min nTPM: 88.8
Std nTPM: 32.9
Median nTPM: 139.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 373.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 281.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 267.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 255.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 252.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 233.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 232.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 205.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 200.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 199.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 196.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 261.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 261.3
FF:10153-102I9 76 years, female 302.5
FF:10169-103B7 60 years, female 220.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 164.8
Pig sample Sample description nTPM
Subiculum
nTPM: 144.9
Samples: 4

Max nTPM: 195.9
Min nTPM: 125.4
Sample A Female 195.9
Sample B Female 128.2
Sample C Male 130.1
Sample D Male 125.4
Dorsal hippocampus
nTPM: 164.8
Samples: 4

Max nTPM: 215.5
Min nTPM: 124.4
Sample A Female 215.5
Sample B Female 151.9
Sample C Male 167.5
Sample D Male 124.4
Entorhinal cortex
nTPM: 134.4
Samples: 4

Max nTPM: 149.9
Min nTPM: 108.2
Sample A Female 149.9
Sample B Female 147.0
Sample C Male 132.6
Sample D Male 108.2
Ventral hippocampus
nTPM: 147.2
Samples: 4

Max nTPM: 175.1
Min nTPM: 105.8
Sample A Female 150.1
Sample B Female 105.8
Sample C Male 175.1
Sample D Male 157.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.0
Samples: 4

Max nTPM: 98.4
Min nTPM: 97.7
Sample A Male 98.0
Sample B Male 98.0
Sample C Female 97.7
Sample D Female 98.4
Hippocampal formation
nTPM: 104.8
Samples: 4

Max nTPM: 108.1
Min nTPM: 101.0
Sample A Male 101.0
Sample B Male 103.5
Sample C Female 108.1
Sample D Female 106.5

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