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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
169.3
nTPM
FANTOM5:
321.9
Scaled Tags Per Million
Pig:
194.3
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
169.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 143.6
2188
Female, age 91, both hemispheres
152.1
2301
Female, age 85, both hemispheres
148.4
2090
Male, age 80, both hemispheres
148.3
1984
Male, age 76, both hemispheres
125.6
Dorsal cochlear nucleus nTPM: 151.0
2187
Female, age 91, both hemispheres
159.1
2378
Male, age 80, both hemispheres
155.0
2802
Male, age 74, right hemisphere
154.5
2370
Male, age 61, both hemispheres
153.7
2058
Male, age 76, both hemispheres
132.8
Dorsal tegmental nucleus nTPM: 161.3
2358
Male, age 61, both hemispheres
189.8
2083
Male, age 80, both hemispheres
168.9
2326
Male, age 74, both hemispheres
154.9
1936
Male, age 76, left hemisphere
131.6
Dorsolateral tegmental area nTPM: 155.1
2337
Male, age 61, both hemispheres
202.1
2654
Male, age 80, both hemispheres
162.3
2751
Female, age 85, both hemispheres
149.0
2360
Male, age 74, both hemispheres
142.2
2141
Male, age 76, both hemispheres
120.1
Kolliker-Fuse nucleus nTPM: 169.3
2163
Male, age 80, both hemispheres
172.9
2793
Female, age 91, left hemisphere
168.4
2315
Male, age 76, right hemisphere
166.6
Lateral lemniscal nuclei nTPM: 143.7
2746
Female, age 85, left hemisphere
157.7
2320
Female, age 91, left hemisphere
143.8
2036
Male, age 80, both hemispheres
143.3
2169
Male, age 76, both hemispheres
143.2
2453
Male, age 74, right hemisphere
130.3
Lateral parabrachial nucleus nTPM: 156.4
2792
Male, age 76, both hemispheres
168.7
2013
Male, age 80, both hemispheres
165.3
2139
Female, age 85, right hemisphere
155.3
2790
Male, age 61, both hemispheres
136.3
Lateral vestibular nucleus nTPM: 157.1
2311
Male, age 80, both hemispheres
158.8
2184
Male, age 76, both hemispheres
155.4
Locus coeruleus nTPM: 140.9
2123
Female, age 91, both hemispheres
168.5
2317
Female, age 72, unknown
148.8
2014
Male, age 55, unknown
145.8
2720
Male, age 74, both hemispheres
141.5
1980
Male, age 76, both hemispheres
132.6
2162
Male, age 80, both hemispheres
131.8
2788
Male, age 74, unknown
117.4
Medial parabrachial nucleus nTPM: 153.9
2170
Female, age 91, both hemispheres
174.2
2854
Male, age 80, both hemispheres
156.3
2156
Male, age 61, both hemispheres
154.7
2463
Female, age 85, right hemisphere
151.2
2786
Male, age 76, both hemispheres
132.8
Medial periolivary nuclei nTPM: 143.8
2791
Male, age 74, right hemisphere
159.9
2081
Male, age 80, both hemispheres
149.9
2171
Female, age 85, both hemispheres
143.7
2063
Male, age 76, both hemispheres
140.7
2458
Female, age 91, both hemispheres
124.9
Motor facial nucleus nTPM: 143.0
2365
Male, age 74, right hemisphere
168.8
2062
Male, age 76, both hemispheres
150.4
2126
Male, age 61, both hemispheres
139.5
2795
Female, age 91, both hemispheres
138.1
2697
Female, age 85, both hemispheres
137.8
2327
Male, age 80, both hemispheres
123.4
Motor trigeminal nucleus nTPM: 142.5
2560
Male, age 74, both hemispheres
160.4
2335
Male, age 61, both hemispheres
145.4
2079
Male, age 80, both hemispheres
140.8
2321
Female, age 91, both hemispheres
139.9
2309
Male, age 76, both hemispheres
126.0
Nuclei of the trapezoid body nTPM: 135.9
1983
Male, age 76, both hemispheres
150.6
2735
Female, age 85, both hemispheres
136.4
2159
Male, age 61, both hemispheres
136.0
2166
Male, age 80, both hemispheres
132.0
2368
Female, age 91, both hemispheres
124.5
Nucleus raphe magnus nTPM: 142.9
2455
Male, age 74, both hemispheres
150.8
2160
Male, age 61, both hemispheres
147.6
2328
Male, age 80, both hemispheres
146.1
2459
Female, age 91, both hemispheres
138.3
2172
Female, age 85, both hemispheres
138.2
2051
Male, age 76, both hemispheres
136.6
Paramedian reticular nucleus nTPM: 142.5
2313
Male, age 61, both hemispheres
154.1
2050
Female, age 85, both hemispheres
148.9
2057
Male, age 80, both hemispheres
145.5
2052
Male, age 76, both hemispheres
121.4
Pedunculopontine tegmental nucleus nTPM: 144.2
2334
Male, age 80, both hemispheres
152.4
2338
Male, age 61, both hemispheres
147.6
1921
Female, age 85, both hemispheres
132.5
Pontine nuclei nTPM: 162.0
2787
Female, age 85, both hemispheres
190.0
1863
Male, age 55, unknown
179.2
2109
Female, age 72, unknown
166.3
2454
Male, age 74, left hemisphere
164.5
2319
Female, age 91, both hemispheres
161.8
2115
Male, age 80, left hemisphere
149.5
1968
Male, age 76, left hemisphere
144.1
2727
Male, age 61, right hemisphere
140.7
Pontine raphe nucleus nTPM: 131.0
2122
Female, age 85, midline
135.8
2853
Male, age 76, midline
126.1
Posteroventral cochlear nucleus nTPM: 148.7
2371
Male, age 61, both hemispheres
161.7
2135
Female, age 91, both hemispheres
159.5
2341
Male, age 80, both hemispheres
153.0
2752
Female, age 85, both hemispheres
135.4
2070
Male, age 76, both hemispheres
133.8
Principal sensory trigeminal nucleus nTPM: 144.5
2324
Male, age 76, both hemispheres
152.8
2367
Female, age 91, left hemisphere
148.3
2008
Male, age 80, left hemisphere
145.0
2158
Male, age 61, both hemispheres
132.0
Reticular pontine nucleus, caudal nTPM: 141.5
2559
Male, age 74, both hemispheres
152.0
2092
Male, age 76, both hemispheres
146.8
2457
Female, age 91, both hemispheres
137.5
2332
Male, age 80, right hemisphere
129.7
Reticular pontine nucleus, oral nTPM: 147.4
1939
Male, age 80, both hemispheres
159.1
2361
Male, age 74, both hemispheres
150.7
2366
Female, age 91, both hemispheres
148.6
2012
Female, age 85, both hemispheres
143.9
2167
Male, age 76, both hemispheres
134.6
Reticulotegmental nucleus nTPM: 144.0
2322
Female, age 91, both hemispheres
151.7
2333
Male, age 80, both hemispheres
149.8
2452
Male, age 74, both hemispheres
146.7
2325
Male, age 76, both hemispheres
127.9
Spinal trigeminal nucleus, oral nTPM: 146.8
2164
Male, age 80, both hemispheres
168.4
2737
Female, age 85, both hemispheres
141.6
1978
Male, age 76, both hemispheres
130.3
Subcoeruleus area nTPM: 143.0
2323
Female, age 91, left hemisphere
159.5
2369
Female, age 85, left hemisphere
152.2
1958
Male, age 80, both hemispheres
146.0
2451
Male, age 74, both hemispheres
132.9
2089
Male, age 76, left hemisphere
124.2
Superior olive nTPM: 149.3
2364
Male, age 74, right hemisphere
174.5
1875
Female, age 85, both hemispheres
155.1
2020
Male, age 76, both hemispheres
146.1
2329
Male, age 80, right hemisphere
140.2
2561
Female, age 91, both hemispheres
130.7
Ventral periolivary nuclei nTPM: 137.7
2023
Male, age 76, both hemispheres
143.5
2165
Male, age 80, both hemispheres
143.2
2130
Female, age 85, both hemispheres
139.0
2794
Female, age 91, left hemisphere
125.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 154.7
2359
Male, age 61, both hemispheres
192.1
2840
Female, age 85, both hemispheres
156.4
2161
Male, age 80, both hemispheres
155.8
1959
Male, age 76, both hemispheres
144.5
2449
Male, age 74, both hemispheres
144.1
2456
Female, age 91, both hemispheres
135.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
