HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:52.2 nTPM
HPA Brain:24.5 nTPM
GTEx:52.2 nTPM
FANTOM5:12.0 Scaled Tags Per Million
Pig:12.3 nTPM
Mouse:65.0 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.5
Sample id Sample description nTPM
Hippocampus
nTPM: 23.8
1898 Male, age 80, left hemisphere 26.5
2621 Female, age 67, right hemisphere 24.2
2529 Female, age 94, left hemisphere 23.8
1855 Male, age 76, left hemisphere 23.5
1911 Female, age 85, right hemisphere 23.2
2148 Female, age 91, left hemisphere 21.8
Dentate gyrus
nTPM: 21.8
1927 Female, age 91, both hemispheres 22.8
2010 Male, age 76, both hemispheres 21.9
2246 Female, age 85, both hemispheres 21.9
2528 Male, age 74, both hemispheres 21.9
2530 Female, age 94, left hemisphere 21.4
2531 Female, age 67, both hemispheres 21.0
Entorhinal gyrus
nTPM: 22.6
1938 Female, age 85, left hemisphere 24.7
2117 Female, age 91, right hemisphere 24.6
2764 Male, age 80, right hemisphere 23.1
2686 Male, age 75, right hemisphere 22.0
1787 Male, age 76, left hemisphere 21.6
2613 Female, age 94, left hemisphere 19.4
Hippocampus, CA1
nTPM: 22.5
2749 Male, age 80, left hemisphere 25.0
1873 Female, age 85, both hemispheres 22.8
2527 Male, age 74, both hemispheres 21.9
2082 Female, age 91, right hemisphere 21.7
2045 Male, age 76, both hemispheres 21.2
Hippocampus, CA2
nTPM: 23.4
1892 Male, age 76, both hemispheres 26.5
1963 Male, age 80, left hemisphere 26.4
1940 Female, age 85, left hemisphere 23.3
2249 Male, age 74, both hemispheres 22.4
2437 Female, age 94, left hemisphere 21.9
2113 Female, age 91, right hemisphere 20.1
Hippocampus, CA3
nTPM: 23.2
1867 Male, age 76, both hemispheres 25.8
2137 Male, age 80, left hemisphere 25.6
1891 Female, age 85, both hemispheres 24.4
2436 Male, age 74, both hemispheres 22.6
2861 Female, age 67, both hemispheres 20.4
2620 Female, age 94, left hemisphere 20.2
Parahippocampal cortex
nTPM: 21.8
1933 Female, age 85, both hemispheres 24.4
1850 Male, age 80, both hemispheres 24.3
1990 Female, age 91, right hemisphere 22.9
2018 Male, age 76, both hemispheres 22.1
2250 Female, age 67, right hemisphere 21.8
2692 Male, age 74, both hemispheres 21.2
2693 Female, age 94, both hemispheres 21.2
2532 Female, age 72, left hemisphere 20.6
2245 Female, age 91, both hemispheres 19.8
2622 Female, age 67, right hemisphere 19.4
Perirhinal gyrus
nTPM: 24.1
1847 Female, age 91, left hemisphere 26.4
1794 Male, age 80, right hemisphere 24.4
1841 Female, age 85, right hemisphere 24.0
2521 Female, age 94, right hemisphere 23.5
2848 Male, age 76, right hemisphere 22.4
Subiculum
nTPM: 24.5
1977 Female, age 85, both hemispheres 26.0
2438 Female, age 94, left hemisphere 25.3
2619 Male, age 74, both hemispheres 24.9
1901 Male, age 80, both hemispheres 24.5
2729 Female, age 91, right hemisphere 23.3
2042 Male, age 76, both hemispheres 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.2
Samples: 197

Max nTPM: 137.4
Min nTPM: 25.1
Std nTPM: 12.0
Median nTPM: 50.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 137.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 89.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 85.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 81.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 77.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 76.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 73.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 73.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 73.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.0
FF:10153-102I9 76 years, female 14.7
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.3
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.7
Sample A Female 11.2
Sample B Female 10.7
Sample C Male 9.7
Sample D Male 10.5
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.2
Sample A Female 14.0
Sample B Female 12.0
Sample C Male 11.8
Sample D Male 11.2
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.2
Sample A Female 11.5
Sample B Female 13.0
Sample C Male 9.8
Sample D Male 9.2
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.5
Sample A Female 12.3
Sample B Female 9.5
Sample C Male 10.6
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.1
Samples: 4

Max nTPM: 68.3
Min nTPM: 59.5
Sample A Male 64.4
Sample B Male 68.0
Sample C Female 68.3
Sample D Female 59.5
Hippocampal formation
nTPM: 60.1
Samples: 4

Max nTPM: 70.0
Min nTPM: 51.9
Sample A Male 70.0
Sample B Male 51.9
Sample C Female 57.0
Sample D Female 61.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
71281528 Antisense, RP_050818_02_E07, Mouse strain C57BL/6J (56 days, male) 3.6

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