HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:60.0 nTPM
HPA Brain:214.9 nTPM
GTEx:60.0 nTPM
FANTOM5:320.0 Scaled Tags Per Million
Pig:203.7 nTPM
Mouse:74.6 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015077Antibody CAB037339
Glial cells LowNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 214.9
Sample id Sample description nTPM
Hippocampus
nTPM: 214.9
2148 Female, age 91, left hemisphere 280.0
1898 Male, age 80, left hemisphere 216.0
2529 Female, age 94, left hemisphere 202.7
1855 Male, age 76, left hemisphere 199.5
1911 Female, age 85, right hemisphere 195.8
2621 Female, age 67, right hemisphere 195.3
Dentate gyrus
nTPM: 166.1
2246 Female, age 85, both hemispheres 178.5
2528 Male, age 74, both hemispheres 177.4
1927 Female, age 91, both hemispheres 176.4
2530 Female, age 94, left hemisphere 172.3
2531 Female, age 67, both hemispheres 147.0
2010 Male, age 76, both hemispheres 145.2
Entorhinal gyrus
nTPM: 181.7
2117 Female, age 91, right hemisphere 214.6
2613 Female, age 94, left hemisphere 194.8
1938 Female, age 85, left hemisphere 178.7
1787 Male, age 76, left hemisphere 174.6
2764 Male, age 80, right hemisphere 173.4
2686 Male, age 75, right hemisphere 154.4
Hippocampus, CA1
nTPM: 166.5
1873 Female, age 85, both hemispheres 207.0
2527 Male, age 74, both hemispheres 191.3
2749 Male, age 80, left hemisphere 165.1
2082 Female, age 91, right hemisphere 148.3
2045 Male, age 76, both hemispheres 120.8
Hippocampus, CA2
nTPM: 178.3
1940 Female, age 85, left hemisphere 194.5
1963 Male, age 80, left hemisphere 191.5
1892 Male, age 76, both hemispheres 180.4
2113 Female, age 91, right hemisphere 176.4
2249 Male, age 74, both hemispheres 171.2
2437 Female, age 94, left hemisphere 155.9
Hippocampus, CA3
nTPM: 167.6
2861 Female, age 67, both hemispheres 197.4
1891 Female, age 85, both hemispheres 190.2
2620 Female, age 94, left hemisphere 174.9
2137 Male, age 80, left hemisphere 164.4
1867 Male, age 76, both hemispheres 148.6
2436 Male, age 74, both hemispheres 130.2
Parahippocampal cortex
nTPM: 175.5
2622 Female, age 67, right hemisphere 205.0
2245 Female, age 91, both hemispheres 188.8
1850 Male, age 80, both hemispheres 184.0
2692 Male, age 74, both hemispheres 183.5
1933 Female, age 85, both hemispheres 182.1
1990 Female, age 91, right hemisphere 177.8
2532 Female, age 72, left hemisphere 175.3
2250 Female, age 67, right hemisphere 165.8
2693 Female, age 94, both hemispheres 151.9
2018 Male, age 76, both hemispheres 140.3
Perirhinal gyrus
nTPM: 175.4
1847 Female, age 91, left hemisphere 194.2
1841 Female, age 85, right hemisphere 182.7
1794 Male, age 80, right hemisphere 180.9
2521 Female, age 94, right hemisphere 165.0
2848 Male, age 76, right hemisphere 154.3
Subiculum
nTPM: 185.5
2729 Female, age 91, right hemisphere 241.2
2619 Male, age 74, both hemispheres 193.1
1901 Male, age 80, both hemispheres 183.4
2438 Female, age 94, left hemisphere 172.2
1977 Female, age 85, both hemispheres 170.9
2042 Male, age 76, both hemispheres 152.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.0
Samples: 197

Max nTPM: 138.6
Min nTPM: 13.3
Std nTPM: 18.3
Median nTPM: 55.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 138.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 112.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 108.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 108.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 106.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 105.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 100.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 100.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 99.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 95.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 95.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 320.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 320.0
FF:10153-102I9 76 years, female 362.8
FF:10169-103B7 60 years, female 277.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 203.7
Pig sample Sample description nTPM
Subiculum
nTPM: 170.5
Samples: 4

Max nTPM: 199.3
Min nTPM: 154.7
Sample A Female 199.3
Sample B Female 157.9
Sample C Male 170.1
Sample D Male 154.7
Dorsal hippocampus
nTPM: 144.6
Samples: 4

Max nTPM: 170.0
Min nTPM: 127.5
Sample A Female 145.0
Sample B Female 135.9
Sample C Male 170.0
Sample D Male 127.5
Entorhinal cortex
nTPM: 203.7
Samples: 4

Max nTPM: 225.3
Min nTPM: 189.1
Sample A Female 202.3
Sample B Female 189.1
Sample C Male 225.3
Sample D Male 198.0
Ventral hippocampus
nTPM: 136.7
Samples: 4

Max nTPM: 178.8
Min nTPM: 98.0
Sample A Female 98.0
Sample B Female 125.2
Sample C Male 144.6
Sample D Male 178.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.6
Samples: 4

Max nTPM: 83.1
Min nTPM: 69.1
Sample A Male 74.1
Sample B Male 71.9
Sample C Female 69.1
Sample D Female 83.1
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 61.1
Min nTPM: 44.3
Sample A Male 61.1
Sample B Male 57.5
Sample C Female 44.3
Sample D Female 51.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69540411 Antisense, RP_050426_01_G02, Mouse strain C57BL/6J (56 days, male) 3.5

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