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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
152.6
nTPM
FANTOM5:
309.1
Scaled Tags Per Million
Pig:
139.5
nTPM
Allen mouse:
0.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
152.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 108.1
2090
Male, age 80, both hemispheres
129.4
1984
Male, age 76, both hemispheres
114.8
2301
Female, age 85, both hemispheres
105.5
2188
Female, age 91, both hemispheres
82.8
Dorsal cochlear nucleus nTPM: 152.6
2378
Male, age 80, both hemispheres
197.9
2802
Male, age 74, right hemisphere
178.7
2370
Male, age 61, both hemispheres
152.0
2058
Male, age 76, both hemispheres
127.4
2187
Female, age 91, both hemispheres
107.2
Dorsal tegmental nucleus nTPM: 130.7
2083
Male, age 80, both hemispheres
144.7
1936
Male, age 76, left hemisphere
144.0
2326
Male, age 74, both hemispheres
134.5
2358
Male, age 61, both hemispheres
99.7
Dorsolateral tegmental area nTPM: 118.1
2654
Male, age 80, both hemispheres
143.8
2141
Male, age 76, both hemispheres
140.5
2360
Male, age 74, both hemispheres
113.2
2751
Female, age 85, both hemispheres
103.0
2337
Male, age 61, both hemispheres
90.1
Kolliker-Fuse nucleus nTPM: 130.0
2315
Male, age 76, right hemisphere
206.2
2163
Male, age 80, both hemispheres
104.9
2793
Female, age 91, left hemisphere
78.9
Lateral lemniscal nuclei nTPM: 76.4
2169
Male, age 76, both hemispheres
92.0
2746
Female, age 85, left hemisphere
83.6
2453
Male, age 74, right hemisphere
74.9
2320
Female, age 91, left hemisphere
69.5
2036
Male, age 80, both hemispheres
62.2
Lateral parabrachial nucleus nTPM: 118.7
2139
Female, age 85, right hemisphere
140.5
2792
Male, age 76, both hemispheres
133.0
2013
Male, age 80, both hemispheres
108.4
2790
Male, age 61, both hemispheres
92.8
Lateral vestibular nucleus nTPM: 139.1
2311
Male, age 80, both hemispheres
162.3
2184
Male, age 76, both hemispheres
115.9
Locus coeruleus nTPM: 140.6
1980
Male, age 76, both hemispheres
151.1
2123
Female, age 91, both hemispheres
150.1
2317
Female, age 72, unknown
144.0
2014
Male, age 55, unknown
143.5
2788
Male, age 74, unknown
134.0
2162
Male, age 80, both hemispheres
131.7
2720
Male, age 74, both hemispheres
129.5
Medial parabrachial nucleus nTPM: 102.6
2786
Male, age 76, both hemispheres
126.3
2156
Male, age 61, both hemispheres
110.7
2170
Female, age 91, both hemispheres
94.9
2854
Male, age 80, both hemispheres
92.3
2463
Female, age 85, right hemisphere
89.0
Medial periolivary nuclei nTPM: 88.8
2791
Male, age 74, right hemisphere
122.0
2063
Male, age 76, both hemispheres
100.6
2171
Female, age 85, both hemispheres
76.8
2458
Female, age 91, both hemispheres
75.3
2081
Male, age 80, both hemispheres
69.4
Motor facial nucleus nTPM: 100.9
2795
Female, age 91, both hemispheres
121.5
2126
Male, age 61, both hemispheres
117.9
2365
Male, age 74, right hemisphere
108.9
2062
Male, age 76, both hemispheres
104.0
2697
Female, age 85, both hemispheres
82.6
2327
Male, age 80, both hemispheres
70.6
Motor trigeminal nucleus nTPM: 97.5
2309
Male, age 76, both hemispheres
129.9
2335
Male, age 61, both hemispheres
120.6
2321
Female, age 91, both hemispheres
91.2
2560
Male, age 74, both hemispheres
80.8
2079
Male, age 80, both hemispheres
64.8
Nuclei of the trapezoid body nTPM: 96.0
1983
Male, age 76, both hemispheres
132.2
2368
Female, age 91, both hemispheres
96.5
2159
Male, age 61, both hemispheres
93.7
2166
Male, age 80, both hemispheres
80.6
2735
Female, age 85, both hemispheres
77.0
Nucleus raphe magnus nTPM: 90.5
2051
Male, age 76, both hemispheres
124.3
2455
Male, age 74, both hemispheres
107.3
2328
Male, age 80, both hemispheres
97.6
2160
Male, age 61, both hemispheres
86.4
2459
Female, age 91, both hemispheres
64.7
2172
Female, age 85, both hemispheres
62.9
Paramedian reticular nucleus nTPM: 125.9
2313
Male, age 61, both hemispheres
165.0
2057
Male, age 80, both hemispheres
124.2
2052
Male, age 76, both hemispheres
117.5
2050
Female, age 85, both hemispheres
97.1
Pedunculopontine tegmental nucleus nTPM: 113.3
1921
Female, age 85, both hemispheres
130.6
2334
Male, age 80, both hemispheres
127.1
2338
Male, age 61, both hemispheres
82.4
Pontine nuclei nTPM: 80.8
1968
Male, age 76, left hemisphere
101.7
1863
Male, age 55, unknown
97.5
2109
Female, age 72, unknown
97.3
2115
Male, age 80, left hemisphere
92.8
2787
Female, age 85, both hemispheres
72.8
2319
Female, age 91, both hemispheres
68.3
2727
Male, age 61, right hemisphere
62.3
2454
Male, age 74, left hemisphere
53.4
Pontine raphe nucleus nTPM: 117.4
2853
Male, age 76, midline
158.4
2122
Female, age 85, midline
76.4
Posteroventral cochlear nucleus nTPM: 107.4
2371
Male, age 61, both hemispheres
131.6
2070
Male, age 76, both hemispheres
118.6
2341
Male, age 80, both hemispheres
101.6
2752
Female, age 85, both hemispheres
98.6
2135
Female, age 91, both hemispheres
86.4
Principal sensory trigeminal nucleus nTPM: 89.4
2324
Male, age 76, both hemispheres
134.2
2158
Male, age 61, both hemispheres
95.7
2008
Male, age 80, left hemisphere
63.8
2367
Female, age 91, left hemisphere
63.6
Reticular pontine nucleus, caudal nTPM: 92.9
2092
Male, age 76, both hemispheres
137.1
2559
Male, age 74, both hemispheres
105.2
2457
Female, age 91, both hemispheres
68.6
2332
Male, age 80, right hemisphere
60.8
Reticular pontine nucleus, oral nTPM: 93.5
1939
Male, age 80, both hemispheres
130.9
2167
Male, age 76, both hemispheres
120.7
2012
Female, age 85, both hemispheres
88.9
2366
Female, age 91, both hemispheres
80.7
2361
Male, age 74, both hemispheres
46.2
Reticulotegmental nucleus nTPM: 112.9
2333
Male, age 80, both hemispheres
119.6
2325
Male, age 76, both hemispheres
117.3
2452
Male, age 74, both hemispheres
116.3
2322
Female, age 91, both hemispheres
98.3
Spinal trigeminal nucleus, oral nTPM: 120.8
1978
Male, age 76, both hemispheres
147.5
2164
Male, age 80, both hemispheres
108.2
2737
Female, age 85, both hemispheres
106.6
Subcoeruleus area nTPM: 107.6
2451
Male, age 74, both hemispheres
134.8
2323
Female, age 91, left hemisphere
110.2
1958
Male, age 80, both hemispheres
109.5
2369
Female, age 85, left hemisphere
99.5
2089
Male, age 76, left hemisphere
84.0
Superior olive nTPM: 92.7
2364
Male, age 74, right hemisphere
125.1
2020
Male, age 76, both hemispheres
96.9
2329
Male, age 80, right hemisphere
88.9
2561
Female, age 91, both hemispheres
78.3
1875
Female, age 85, both hemispheres
74.4
Ventral periolivary nuclei nTPM: 87.8
2023
Male, age 76, both hemispheres
106.9
2165
Male, age 80, both hemispheres
98.1
2130
Female, age 85, both hemispheres
79.7
2794
Female, age 91, left hemisphere
66.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 95.2
1959
Male, age 76, both hemispheres
116.4
2840
Female, age 85, both hemispheres
106.3
2359
Male, age 61, both hemispheres
95.3
2161
Male, age 80, both hemispheres
86.9
2449
Male, age 74, both hemispheres
84.5
2456
Female, age 91, both hemispheres
81.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
139.5
Pig sample
Sample description
nTPM
Pons nTPM: 139.6
Samples: 4
Max nTPM: 189.6
Min nTPM: 108.2
Sample A
Female
189.6
Sample B
Female
108.2
Sample C
Male
117.8
Sample D
Male
142.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
