HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:27.5 nTPM
HPA Brain:28.7 nTPM
GTEx:27.5 nTPM
FANTOM5:5.9 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:5.5 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024630
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
2529 Female, age 94, left hemisphere 32.5
2621 Female, age 67, right hemisphere 28.7
2148 Female, age 91, left hemisphere 28.4
1855 Male, age 76, left hemisphere 26.0
1911 Female, age 85, right hemisphere 26.0
1898 Male, age 80, left hemisphere 25.6
Dentate gyrus
nTPM: 26.7
2530 Female, age 94, left hemisphere 30.2
2531 Female, age 67, both hemispheres 29.3
2528 Male, age 74, both hemispheres 26.7
2246 Female, age 85, both hemispheres 26.6
2010 Male, age 76, both hemispheres 25.6
1927 Female, age 91, both hemispheres 22.1
Entorhinal gyrus
nTPM: 28.7
2686 Male, age 75, right hemisphere 32.1
2117 Female, age 91, right hemisphere 31.8
2764 Male, age 80, right hemisphere 29.3
1787 Male, age 76, left hemisphere 27.6
2613 Female, age 94, left hemisphere 27.2
1938 Female, age 85, left hemisphere 24.3
Hippocampus, CA1
nTPM: 24.4
2082 Female, age 91, right hemisphere 29.3
2527 Male, age 74, both hemispheres 27.3
1873 Female, age 85, both hemispheres 23.7
2749 Male, age 80, left hemisphere 22.1
2045 Male, age 76, both hemispheres 19.7
Hippocampus, CA2
nTPM: 25.9
1963 Male, age 80, left hemisphere 28.8
2437 Female, age 94, left hemisphere 28.4
2113 Female, age 91, right hemisphere 26.1
1940 Female, age 85, left hemisphere 25.7
2249 Male, age 74, both hemispheres 25.1
1892 Male, age 76, both hemispheres 21.5
Hippocampus, CA3
nTPM: 25.7
2861 Female, age 67, both hemispheres 35.6
1891 Female, age 85, both hemispheres 25.6
2436 Male, age 74, both hemispheres 25.2
2620 Female, age 94, left hemisphere 23.1
1867 Male, age 76, both hemispheres 23.0
2137 Male, age 80, left hemisphere 21.5
Parahippocampal cortex
nTPM: 26.9
2622 Female, age 67, right hemisphere 33.3
2692 Male, age 74, both hemispheres 31.3
2532 Female, age 72, left hemisphere 30.1
2245 Female, age 91, both hemispheres 26.5
2250 Female, age 67, right hemisphere 26.1
1933 Female, age 85, both hemispheres 25.2
1990 Female, age 91, right hemisphere 25.2
2018 Male, age 76, both hemispheres 24.7
2693 Female, age 94, both hemispheres 23.7
1850 Male, age 80, both hemispheres 22.9
Perirhinal gyrus
nTPM: 24.5
1794 Male, age 80, right hemisphere 27.2
2848 Male, age 76, right hemisphere 25.9
2521 Female, age 94, right hemisphere 24.0
1841 Female, age 85, right hemisphere 23.5
1847 Female, age 91, left hemisphere 22.1
Subiculum
nTPM: 27.0
2438 Female, age 94, left hemisphere 29.8
2619 Male, age 74, both hemispheres 29.6
2729 Female, age 91, right hemisphere 29.0
1977 Female, age 85, both hemispheres 25.2
2042 Male, age 76, both hemispheres 24.8
1901 Male, age 80, both hemispheres 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.5
Samples: 197

Max nTPM: 53.9
Min nTPM: 15.7
Std nTPM: 6.5
Median nTPM: 26.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 53.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 49.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 44.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 43.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 42.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 42.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 42.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 41.1
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 41.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 40.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.9
FF:10153-102I9 76 years, female 7.8
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 23.3
Min nTPM: 16.0
Sample A Female 23.3
Sample B Female 16.6
Sample C Male 16.0
Sample D Male 16.1
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 13.5
Sample A Female 21.1
Sample B Female 15.2
Sample C Male 20.2
Sample D Male 13.5
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.6
Min nTPM: 18.4
Sample A Female 19.0
Sample B Female 20.7
Sample C Male 21.6
Sample D Male 18.4
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 13.8
Sample A Female 18.1
Sample B Female 13.8
Sample C Male 22.9
Sample D Male 17.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.6
Sample A Male 6.2
Sample B Male 6.0
Sample C Female 5.1
Sample D Female 4.6
Hippocampal formation
nTPM: 5.3
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.7
Sample A Male 5.7
Sample B Male 5.0
Sample C Female 4.7
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70539181 Antisense, RP_050324_02_D11, Mouse strain C57BL/6J (56 days, male) 1.5

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