HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.7 nTPM
HPA Brain:41.2 nTPM
GTEx:12.7 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:34.8 nTPM
Mouse:23.4 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
1898 Male, age 80, left hemisphere 25.8
2148 Female, age 91, left hemisphere 23.8
2529 Female, age 94, left hemisphere 22.4
2621 Female, age 67, right hemisphere 19.2
1855 Male, age 76, left hemisphere 18.8
1911 Female, age 85, right hemisphere 13.5
Dentate gyrus
nTPM: 20.9
2531 Female, age 67, both hemispheres 25.0
1927 Female, age 91, both hemispheres 21.4
2246 Female, age 85, both hemispheres 21.3
2530 Female, age 94, left hemisphere 20.7
2010 Male, age 76, both hemispheres 19.8
2528 Male, age 74, both hemispheres 17.6
Entorhinal gyrus
nTPM: 41.2
1938 Female, age 85, left hemisphere 51.8
2613 Female, age 94, left hemisphere 48.0
2764 Male, age 80, right hemisphere 43.8
2686 Male, age 75, right hemisphere 42.5
1787 Male, age 76, left hemisphere 32.2
2117 Female, age 91, right hemisphere 29.0
Hippocampus, CA1
nTPM: 19.2
2749 Male, age 80, left hemisphere 23.4
1873 Female, age 85, both hemispheres 20.8
2045 Male, age 76, both hemispheres 19.7
2082 Female, age 91, right hemisphere 16.9
2527 Male, age 74, both hemispheres 15.0
Hippocampus, CA2
nTPM: 20.4
2437 Female, age 94, left hemisphere 28.2
1892 Male, age 76, both hemispheres 27.9
1963 Male, age 80, left hemisphere 24.7
2113 Female, age 91, right hemisphere 15.6
2249 Male, age 74, both hemispheres 13.6
1940 Female, age 85, left hemisphere 12.5
Hippocampus, CA3
nTPM: 23.7
1891 Female, age 85, both hemispheres 30.6
2861 Female, age 67, both hemispheres 30.0
2436 Male, age 74, both hemispheres 27.0
2620 Female, age 94, left hemisphere 23.6
1867 Male, age 76, both hemispheres 17.6
2137 Male, age 80, left hemisphere 13.3
Parahippocampal cortex
nTPM: 38.7
2622 Female, age 67, right hemisphere 46.6
1933 Female, age 85, both hemispheres 46.4
2532 Female, age 72, left hemisphere 45.0
2692 Male, age 74, both hemispheres 41.2
2245 Female, age 91, both hemispheres 40.8
1990 Female, age 91, right hemisphere 39.9
2693 Female, age 94, both hemispheres 37.3
1850 Male, age 80, both hemispheres 37.1
2250 Female, age 67, right hemisphere 31.8
2018 Male, age 76, both hemispheres 21.2
Perirhinal gyrus
nTPM: 39.9
1847 Female, age 91, left hemisphere 52.1
1841 Female, age 85, right hemisphere 41.4
1794 Male, age 80, right hemisphere 38.2
2521 Female, age 94, right hemisphere 34.1
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 29.7
1977 Female, age 85, both hemispheres 44.5
2619 Male, age 74, both hemispheres 42.0
2438 Female, age 94, left hemisphere 37.7
1901 Male, age 80, both hemispheres 21.8
2729 Female, age 91, right hemisphere 18.1
2042 Male, age 76, both hemispheres 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.7
Samples: 197

Max nTPM: 61.0
Min nTPM: 3.1
Std nTPM: 10.1
Median nTPM: 9.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 61.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 60.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 53.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 52.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 48.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 38.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 37.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 34.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 33.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10153-102I9 76 years, female 30.3
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.8
Pig sample Sample description nTPM
Subiculum
nTPM: 34.8
Samples: 4

Max nTPM: 49.8
Min nTPM: 25.3
Sample A Female 49.8
Sample B Female 33.1
Sample C Male 31.1
Sample D Male 25.3
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 25.5
Min nTPM: 16.3
Sample A Female 25.5
Sample B Female 21.3
Sample C Male 17.9
Sample D Male 16.3
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 30.3
Min nTPM: 21.6
Sample A Female 26.6
Sample B Female 21.6
Sample C Male 30.3
Sample D Male 24.0
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 10.9
Sample A Female 10.9
Sample B Female 18.1
Sample C Male 16.9
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.4
Samples: 4

Max nTPM: 25.2
Min nTPM: 19.7
Sample A Male 23.7
Sample B Male 25.0
Sample C Female 19.7
Sample D Female 25.2
Hippocampal formation
nTPM: 19.4
Samples: 4

Max nTPM: 20.9
Min nTPM: 17.1
Sample A Male 17.1
Sample B Male 20.9
Sample C Female 20.4
Sample D Female 19.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
71789885 Antisense, RP_050921_03_G11, Mouse strain C57BL/6J (56 days, male) 6.7

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