HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:35.7 nTPM
HPA Brain:20.5 nTPM
GTEx:35.7 nTPM
FANTOM5:24.4 Scaled Tags Per Million
Pig:37.6 nTPM
Mouse:15.1 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001540
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 18.6
2529 Female, age 94, left hemisphere 24.3
2621 Female, age 67, right hemisphere 18.1
1898 Male, age 80, left hemisphere 17.9
2148 Female, age 91, left hemisphere 17.8
1911 Female, age 85, right hemisphere 17.0
1855 Male, age 76, left hemisphere 16.3
Dentate gyrus
nTPM: 17.3
2010 Male, age 76, both hemispheres 20.5
2246 Female, age 85, both hemispheres 18.9
2531 Female, age 67, both hemispheres 17.2
1927 Female, age 91, both hemispheres 17.1
2530 Female, age 94, left hemisphere 17.0
2528 Male, age 74, both hemispheres 12.9
Entorhinal gyrus
nTPM: 18.0
1938 Female, age 85, left hemisphere 19.5
1787 Male, age 76, left hemisphere 18.4
2117 Female, age 91, right hemisphere 18.3
2764 Male, age 80, right hemisphere 17.9
2613 Female, age 94, left hemisphere 17.1
2686 Male, age 75, right hemisphere 16.9
Hippocampus, CA1
nTPM: 17.1
2527 Male, age 74, both hemispheres 20.5
2045 Male, age 76, both hemispheres 17.7
2749 Male, age 80, left hemisphere 16.1
1873 Female, age 85, both hemispheres 16.0
2082 Female, age 91, right hemisphere 15.3
Hippocampus, CA2
nTPM: 18.6
2437 Female, age 94, left hemisphere 20.5
1892 Male, age 76, both hemispheres 20.2
2249 Male, age 74, both hemispheres 19.3
1940 Female, age 85, left hemisphere 18.3
1963 Male, age 80, left hemisphere 16.7
2113 Female, age 91, right hemisphere 16.6
Hippocampus, CA3
nTPM: 16.6
2436 Male, age 74, both hemispheres 19.6
1867 Male, age 76, both hemispheres 16.7
1891 Female, age 85, both hemispheres 16.1
2620 Female, age 94, left hemisphere 16.1
2137 Male, age 80, left hemisphere 15.9
2861 Female, age 67, both hemispheres 15.6
Parahippocampal cortex
nTPM: 18.3
2245 Female, age 91, both hemispheres 21.4
2018 Male, age 76, both hemispheres 20.9
1933 Female, age 85, both hemispheres 20.8
1850 Male, age 80, both hemispheres 20.3
1990 Female, age 91, right hemisphere 18.5
2692 Male, age 74, both hemispheres 17.1
2532 Female, age 72, left hemisphere 16.6
2250 Female, age 67, right hemisphere 16.5
2693 Female, age 94, both hemispheres 15.7
2622 Female, age 67, right hemisphere 15.5
Perirhinal gyrus
nTPM: 20.5
1794 Male, age 80, right hemisphere 22.5
1841 Female, age 85, right hemisphere 22.1
2521 Female, age 94, right hemisphere 19.6
2848 Male, age 76, right hemisphere 19.2
1847 Female, age 91, left hemisphere 18.8
Subiculum
nTPM: 18.6
2438 Female, age 94, left hemisphere 19.7
2619 Male, age 74, both hemispheres 19.2
2042 Male, age 76, both hemispheres 18.5
1901 Male, age 80, both hemispheres 18.4
1977 Female, age 85, both hemispheres 18.1
2729 Female, age 91, right hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 94.3
Min nTPM: 16.6
Std nTPM: 7.9
Median nTPM: 34.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 94.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 54.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 53.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 52.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 50.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 49.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 49.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 48.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 47.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.4
FF:10169-103B7 60 years, female 27.0
FF:10153-102I9 76 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.6
Pig sample Sample description nTPM
Subiculum
nTPM: 28.8
Samples: 4

Max nTPM: 38.3
Min nTPM: 24.7
Sample A Female 38.3
Sample B Female 26.5
Sample C Male 25.7
Sample D Male 24.7
Dorsal hippocampus
nTPM: 37.6
Samples: 4

Max nTPM: 44.6
Min nTPM: 31.5
Sample A Female 44.6
Sample B Female 31.5
Sample C Male 40.3
Sample D Male 34.1
Entorhinal cortex
nTPM: 35.8
Samples: 4

Max nTPM: 48.4
Min nTPM: 30.6
Sample A Female 32.0
Sample B Female 48.4
Sample C Male 30.6
Sample D Male 32.3
Ventral hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 37.9
Min nTPM: 26.5
Sample A Female 37.9
Sample B Female 26.5
Sample C Male 37.6
Sample D Male 29.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.3
Sample A Male 13.3
Sample B Male 15.3
Sample C Female 14.6
Sample D Female 17.1
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.8
Sample A Male 15.9
Sample B Male 13.3
Sample C Female 14.7
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69114902 Antisense, RP_050317_02_C08, Mouse strain C57BL/6J (56 days, male) 3.5

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