HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1687.2 nTPM
HPA Brain:1100.9 nTPM
GTEx:1687.2 nTPM
FANTOM5:527.1 Scaled Tags Per Million
Pig:2030.0 nTPM
Mouse:2401.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041344Antibody HPA049132Antibody CAB013048
Glial cells LowLowMedium
Neuronal cells LowMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1100.9
Sample id Sample description nTPM
Hippocampus
nTPM: 999.5
1898 Male, age 80, left hemisphere 1240.8
2529 Female, age 94, left hemisphere 1185.0
1855 Male, age 76, left hemisphere 948.6
2621 Female, age 67, right hemisphere 914.8
2148 Female, age 91, left hemisphere 865.9
1911 Female, age 85, right hemisphere 841.8
Dentate gyrus
nTPM: 960.4
2010 Male, age 76, both hemispheres 1262.2
2530 Female, age 94, left hemisphere 1109.6
1927 Female, age 91, both hemispheres 1027.8
2246 Female, age 85, both hemispheres 922.1
2531 Female, age 67, both hemispheres 727.8
2528 Male, age 74, both hemispheres 712.9
Entorhinal gyrus
nTPM: 834.9
2764 Male, age 80, right hemisphere 1034.6
1938 Female, age 85, left hemisphere 998.9
2117 Female, age 91, right hemisphere 911.4
1787 Male, age 76, left hemisphere 853.3
2686 Male, age 75, right hemisphere 641.4
2613 Female, age 94, left hemisphere 569.5
Hippocampus, CA1
nTPM: 1100.9
2749 Male, age 80, left hemisphere 1419.1
1873 Female, age 85, both hemispheres 1141.6
2527 Male, age 74, both hemispheres 1121.8
2045 Male, age 76, both hemispheres 1041.4
2082 Female, age 91, right hemisphere 780.8
Hippocampus, CA2
nTPM: 1012.3
1892 Male, age 76, both hemispheres 1258.7
1963 Male, age 80, left hemisphere 1234.5
2249 Male, age 74, both hemispheres 967.6
2437 Female, age 94, left hemisphere 941.7
1940 Female, age 85, left hemisphere 874.0
2113 Female, age 91, right hemisphere 797.2
Hippocampus, CA3
nTPM: 901.9
1867 Male, age 76, both hemispheres 1112.9
2137 Male, age 80, left hemisphere 990.9
2436 Male, age 74, both hemispheres 951.1
1891 Female, age 85, both hemispheres 862.7
2620 Female, age 94, left hemisphere 819.0
2861 Female, age 67, both hemispheres 674.8
Parahippocampal cortex
nTPM: 861.5
2245 Female, age 91, both hemispheres 1103.0
1850 Male, age 80, both hemispheres 1042.9
1933 Female, age 85, both hemispheres 998.0
2018 Male, age 76, both hemispheres 995.2
1990 Female, age 91, right hemisphere 945.0
2532 Female, age 72, left hemisphere 894.4
2250 Female, age 67, right hemisphere 810.0
2692 Male, age 74, both hemispheres 734.6
2622 Female, age 67, right hemisphere 559.6
2693 Female, age 94, both hemispheres 532.2
Perirhinal gyrus
nTPM: 973.1
1847 Female, age 91, left hemisphere 1312.3
1794 Male, age 80, right hemisphere 1083.3
1841 Female, age 85, right hemisphere 902.1
2848 Male, age 76, right hemisphere 799.3
2521 Female, age 94, right hemisphere 768.5
Subiculum
nTPM: 923.0
2438 Female, age 94, left hemisphere 1086.7
1901 Male, age 80, both hemispheres 1006.4
1977 Female, age 85, both hemispheres 947.6
2042 Male, age 76, both hemispheres 889.6
2619 Male, age 74, both hemispheres 889.1
2729 Female, age 91, right hemisphere 718.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1687.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1687.2
Samples: 197

Max nTPM: 3852.4
Min nTPM: 1031.5
Std nTPM: 404.8
Median nTPM: 1627.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 3852.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 3178.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 2722.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 2709.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 2489.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2483.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 2452.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 2451.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 2437.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 2428.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 2411.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 527.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 527.1
FF:10169-103B7 60 years, female 640.8
FF:10153-102I9 76 years, female 413.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2030.0
Pig sample Sample description nTPM
Subiculum
nTPM: 1541.2
Samples: 4

Max nTPM: 2018.8
Min nTPM: 1276.6
Sample A Female 2018.8
Sample B Female 1556.5
Sample C Male 1313.0
Sample D Male 1276.6
Dorsal hippocampus
nTPM: 2030.1
Samples: 4

Max nTPM: 2837.9
Min nTPM: 1469.4
Sample A Female 2837.9
Sample B Female 2049.4
Sample C Male 1763.5
Sample D Male 1469.4
Entorhinal cortex
nTPM: 1535.7
Samples: 4

Max nTPM: 1890.0
Min nTPM: 1118.6
Sample A Female 1688.8
Sample B Female 1890.0
Sample C Male 1445.2
Sample D Male 1118.6
Ventral hippocampus
nTPM: 1824.1
Samples: 4

Max nTPM: 2043.5
Min nTPM: 1414.8
Sample A Female 2043.5
Sample B Female 1414.8
Sample C Male 1970.2
Sample D Male 1867.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2401.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2153.7
Samples: 4

Max nTPM: 2332.1
Min nTPM: 1966.0
Sample A Male 1966.0
Sample B Male 2115.7
Sample C Female 2332.1
Sample D Female 2201.1
Hippocampal formation
nTPM: 2401.9
Samples: 4

Max nTPM: 2514.8
Min nTPM: 2164.0
Sample A Male 2493.7
Sample B Male 2164.0
Sample C Female 2514.8
Sample D Female 2435.2

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