HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:45.6 nTPM
HPA Brain:51.8 nTPM
GTEx:45.6 nTPM
FANTOM5:98.7 Scaled Tags Per Million
Pig:135.0 nTPM
Mouse:58.0 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016484Antibody CAB011711Antibody CAB012428
Glial cells LowLowMedium
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.2
2621 Female, age 67, right hemisphere 52.0
1898 Male, age 80, left hemisphere 51.1
2529 Female, age 94, left hemisphere 49.1
1855 Male, age 76, left hemisphere 47.9
1911 Female, age 85, right hemisphere 45.0
2148 Female, age 91, left hemisphere 44.0
Dentate gyrus
nTPM: 46.1
2246 Female, age 85, both hemispheres 50.6
2010 Male, age 76, both hemispheres 49.4
2530 Female, age 94, left hemisphere 46.8
1927 Female, age 91, both hemispheres 46.6
2531 Female, age 67, both hemispheres 42.5
2528 Male, age 74, both hemispheres 40.6
Entorhinal gyrus
nTPM: 45.8
1787 Male, age 76, left hemisphere 49.1
1938 Female, age 85, left hemisphere 49.0
2117 Female, age 91, right hemisphere 47.0
2764 Male, age 80, right hemisphere 46.1
2686 Male, age 75, right hemisphere 43.9
2613 Female, age 94, left hemisphere 40.0
Hippocampus, CA1
nTPM: 49.4
2749 Male, age 80, left hemisphere 57.6
2045 Male, age 76, both hemispheres 51.5
1873 Female, age 85, both hemispheres 50.1
2527 Male, age 74, both hemispheres 45.9
2082 Female, age 91, right hemisphere 41.6
Hippocampus, CA2
nTPM: 47.4
1892 Male, age 76, both hemispheres 57.2
1963 Male, age 80, left hemisphere 48.0
1940 Female, age 85, left hemisphere 46.7
2249 Male, age 74, both hemispheres 44.8
2437 Female, age 94, left hemisphere 44.4
2113 Female, age 91, right hemisphere 43.1
Hippocampus, CA3
nTPM: 47.3
1867 Male, age 76, both hemispheres 51.9
2137 Male, age 80, left hemisphere 51.7
2620 Female, age 94, left hemisphere 48.5
1891 Female, age 85, both hemispheres 48.3
2436 Male, age 74, both hemispheres 41.9
2861 Female, age 67, both hemispheres 41.6
Parahippocampal cortex
nTPM: 47.7
1850 Male, age 80, both hemispheres 53.2
2532 Female, age 72, left hemisphere 51.6
2245 Female, age 91, both hemispheres 50.6
2250 Female, age 67, right hemisphere 50.2
1990 Female, age 91, right hemisphere 47.7
1933 Female, age 85, both hemispheres 47.3
2018 Male, age 76, both hemispheres 47.0
2693 Female, age 94, both hemispheres 44.3
2622 Female, age 67, right hemisphere 42.9
2692 Male, age 74, both hemispheres 42.3
Perirhinal gyrus
nTPM: 51.8
1841 Female, age 85, right hemisphere 54.7
2848 Male, age 76, right hemisphere 54.7
1847 Female, age 91, left hemisphere 52.8
1794 Male, age 80, right hemisphere 51.6
2521 Female, age 94, right hemisphere 45.4
Subiculum
nTPM: 47.7
1901 Male, age 80, both hemispheres 52.6
2042 Male, age 76, both hemispheres 50.8
1977 Female, age 85, both hemispheres 50.4
2619 Male, age 74, both hemispheres 45.6
2438 Female, age 94, left hemisphere 45.1
2729 Female, age 91, right hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.6
Samples: 197

Max nTPM: 70.6
Min nTPM: 32.4
Std nTPM: 7.0
Median nTPM: 44.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 70.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 65.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 63.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 62.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 62.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 61.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 60.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 59.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 57.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.7
FF:10169-103B7 60 years, female 108.0
FF:10153-102I9 76 years, female 89.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 135.0
Pig sample Sample description nTPM
Subiculum
nTPM: 115.3
Samples: 4

Max nTPM: 141.4
Min nTPM: 104.7
Sample A Female 141.4
Sample B Female 104.7
Sample C Male 107.6
Sample D Male 107.4
Dorsal hippocampus
nTPM: 135.0
Samples: 4

Max nTPM: 154.9
Min nTPM: 116.9
Sample A Female 154.9
Sample B Female 130.4
Sample C Male 137.7
Sample D Male 116.9
Entorhinal cortex
nTPM: 107.4
Samples: 4

Max nTPM: 125.5
Min nTPM: 94.6
Sample A Female 125.5
Sample B Female 109.6
Sample C Male 99.7
Sample D Male 94.6
Ventral hippocampus
nTPM: 117.4
Samples: 4

Max nTPM: 132.9
Min nTPM: 88.8
Sample A Female 117.0
Sample B Female 88.8
Sample C Male 130.9
Sample D Male 132.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 59.1
Min nTPM: 53.2
Sample A Male 53.2
Sample B Male 56.5
Sample C Female 59.1
Sample D Female 56.0
Hippocampal formation
nTPM: 58.0
Samples: 4

Max nTPM: 60.1
Min nTPM: 54.9
Sample A Male 60.1
Sample B Male 54.9
Sample C Female 58.1
Sample D Female 58.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
69262297 Antisense, RP_050303_01_G02, Mouse strain C57BL/6J (56 days, male) 7.0

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