HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:15.6 nTPM
HPA Brain:40.1 nTPM
GTEx:15.6 nTPM
FANTOM5:54.5 Scaled Tags Per Million
Mouse:46.1 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036891Antibody HPA036892Antibody HPA061498
Glial cells HighMediumNot detected
Neuronal cells MediumMediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.1
Sample id Sample description nTPM
Hippocampus
nTPM: 37.3
1898 Male, age 80, left hemisphere 48.9
2148 Female, age 91, left hemisphere 37.1
2621 Female, age 67, right hemisphere 36.9
2529 Female, age 94, left hemisphere 34.8
1855 Male, age 76, left hemisphere 33.1
1911 Female, age 85, right hemisphere 33.0
Dentate gyrus
nTPM: 35.8
1927 Female, age 91, both hemispheres 40.6
2010 Male, age 76, both hemispheres 38.1
2530 Female, age 94, left hemisphere 36.5
2246 Female, age 85, both hemispheres 34.3
2528 Male, age 74, both hemispheres 33.8
2531 Female, age 67, both hemispheres 31.3
Entorhinal gyrus
nTPM: 36.3
1938 Female, age 85, left hemisphere 39.0
2117 Female, age 91, right hemisphere 38.7
2764 Male, age 80, right hemisphere 37.4
2613 Female, age 94, left hemisphere 35.2
1787 Male, age 76, left hemisphere 34.0
2686 Male, age 75, right hemisphere 33.4
Hippocampus, CA1
nTPM: 40.1
2749 Male, age 80, left hemisphere 62.0
1873 Female, age 85, both hemispheres 41.7
2527 Male, age 74, both hemispheres 37.6
2045 Male, age 76, both hemispheres 31.1
2082 Female, age 91, right hemisphere 27.9
Hippocampus, CA2
nTPM: 38.9
1963 Male, age 80, left hemisphere 55.0
2249 Male, age 74, both hemispheres 40.0
1892 Male, age 76, both hemispheres 38.8
1940 Female, age 85, left hemisphere 36.5
2437 Female, age 94, left hemisphere 35.0
2113 Female, age 91, right hemisphere 28.3
Hippocampus, CA3
nTPM: 37.9
2137 Male, age 80, left hemisphere 43.7
2620 Female, age 94, left hemisphere 40.9
1867 Male, age 76, both hemispheres 38.0
1891 Female, age 85, both hemispheres 36.5
2436 Male, age 74, both hemispheres 34.4
2861 Female, age 67, both hemispheres 34.2
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 41.5
1990 Female, age 91, right hemisphere 39.9
1933 Female, age 85, both hemispheres 36.4
2692 Male, age 74, both hemispheres 35.6
2693 Female, age 94, both hemispheres 34.4
2245 Female, age 91, both hemispheres 34.3
2532 Female, age 72, left hemisphere 33.6
2250 Female, age 67, right hemisphere 33.2
2622 Female, age 67, right hemisphere 32.0
2018 Male, age 76, both hemispheres 29.3
Perirhinal gyrus
nTPM: 37.8
1794 Male, age 80, right hemisphere 42.9
2521 Female, age 94, right hemisphere 39.9
1847 Female, age 91, left hemisphere 38.2
1841 Female, age 85, right hemisphere 37.9
2848 Male, age 76, right hemisphere 30.3
Subiculum
nTPM: 36.3
1901 Male, age 80, both hemispheres 44.8
1977 Female, age 85, both hemispheres 41.1
2729 Female, age 91, right hemisphere 34.2
2042 Male, age 76, both hemispheres 34.0
2619 Male, age 74, both hemispheres 33.9
2438 Female, age 94, left hemisphere 29.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 25.2
Min nTPM: 7.0
Std nTPM: 2.7
Median nTPM: 15.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 25.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 22.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 22.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 22.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 21.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 19.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.5
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 48.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 47.5
Min nTPM: 37.7
Sample A Male 40.3
Sample B Male 40.2
Sample C Female 37.7
Sample D Female 47.5
Hippocampal formation
nTPM: 46.1
Samples: 4

Max nTPM: 56.7
Min nTPM: 37.6
Sample A Male 37.6
Sample B Male 50.3
Sample C Female 56.7
Sample D Female 39.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
70429064 Antisense, RP_050609_04_H07, Mouse strain C57BL/6J (56 days, male) 7.8

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