HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:12.1 nTPM
HPA Brain:30.5 nTPM
GTEx:12.1 nTPM
FANTOM5:31.8 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005553
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.5
1911 Female, age 85, right hemisphere 32.9
2148 Female, age 91, left hemisphere 28.6
1855 Male, age 76, left hemisphere 27.6
2621 Female, age 67, right hemisphere 26.0
2529 Female, age 94, left hemisphere 25.6
1898 Male, age 80, left hemisphere 24.1
Dentate gyrus
nTPM: 28.3
2528 Male, age 74, both hemispheres 32.9
2246 Female, age 85, both hemispheres 29.6
2530 Female, age 94, left hemisphere 28.6
2531 Female, age 67, both hemispheres 27.4
2010 Male, age 76, both hemispheres 25.9
1927 Female, age 91, both hemispheres 25.3
Entorhinal gyrus
nTPM: 29.7
2613 Female, age 94, left hemisphere 39.0
2686 Male, age 75, right hemisphere 31.9
1938 Female, age 85, left hemisphere 27.7
1787 Male, age 76, left hemisphere 27.0
2117 Female, age 91, right hemisphere 26.7
2764 Male, age 80, right hemisphere 26.1
Hippocampus, CA1
nTPM: 29.1
1873 Female, age 85, both hemispheres 33.7
2527 Male, age 74, both hemispheres 30.6
2082 Female, age 91, right hemisphere 29.3
2045 Male, age 76, both hemispheres 27.3
2749 Male, age 80, left hemisphere 24.8
Hippocampus, CA2
nTPM: 27.1
2437 Female, age 94, left hemisphere 31.1
1892 Male, age 76, both hemispheres 30.8
1963 Male, age 80, left hemisphere 27.5
2113 Female, age 91, right hemisphere 26.1
2249 Male, age 74, both hemispheres 24.3
1940 Female, age 85, left hemisphere 22.6
Hippocampus, CA3
nTPM: 25.6
2620 Female, age 94, left hemisphere 29.7
2436 Male, age 74, both hemispheres 27.3
1867 Male, age 76, both hemispheres 27.2
1891 Female, age 85, both hemispheres 27.2
2137 Male, age 80, left hemisphere 22.2
2861 Female, age 67, both hemispheres 19.9
Parahippocampal cortex
nTPM: 27.3
2692 Male, age 74, both hemispheres 37.7
1850 Male, age 80, both hemispheres 29.5
1933 Female, age 85, both hemispheres 28.8
2693 Female, age 94, both hemispheres 27.8
2622 Female, age 67, right hemisphere 27.2
2018 Male, age 76, both hemispheres 25.1
2245 Female, age 91, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.7
2532 Female, age 72, left hemisphere 24.7
2250 Female, age 67, right hemisphere 22.6
Perirhinal gyrus
nTPM: 27.6
2848 Male, age 76, right hemisphere 34.0
1794 Male, age 80, right hemisphere 27.6
1841 Female, age 85, right hemisphere 26.5
1847 Female, age 91, left hemisphere 25.7
2521 Female, age 94, right hemisphere 24.4
Subiculum
nTPM: 30.5
2619 Male, age 74, both hemispheres 34.3
2042 Male, age 76, both hemispheres 33.8
2438 Female, age 94, left hemisphere 30.3
1977 Female, age 85, both hemispheres 29.0
1901 Male, age 80, both hemispheres 28.2
2729 Female, age 91, right hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 22.5
Min nTPM: 4.6
Std nTPM: 2.7
Median nTPM: 11.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 18.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 18.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 17.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 17.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 17.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 16.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 16.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.8
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 30.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org