HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:58.5 nTPM
HPA Brain:110.6 nTPM
GTEx:58.5 nTPM
FANTOM5:12.7 Scaled Tags Per Million
Pig:129.1 nTPM
Mouse:25.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023561
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.6
Sample id Sample description nTPM
Hippocampus
nTPM: 110.6
2529 Female, age 94, left hemisphere 137.2
2148 Female, age 91, left hemisphere 115.9
2621 Female, age 67, right hemisphere 106.4
1911 Female, age 85, right hemisphere 101.9
1898 Male, age 80, left hemisphere 101.8
1855 Male, age 76, left hemisphere 100.2
Dentate gyrus
nTPM: 99.5
2530 Female, age 94, left hemisphere 113.4
2528 Male, age 74, both hemispheres 109.4
2246 Female, age 85, both hemispheres 106.5
2531 Female, age 67, both hemispheres 100.3
1927 Female, age 91, both hemispheres 86.6
2010 Male, age 76, both hemispheres 81.0
Entorhinal gyrus
nTPM: 106.2
2117 Female, age 91, right hemisphere 134.1
1787 Male, age 76, left hemisphere 104.0
2764 Male, age 80, right hemisphere 103.8
2613 Female, age 94, left hemisphere 102.5
1938 Female, age 85, left hemisphere 98.4
2686 Male, age 75, right hemisphere 94.1
Hippocampus, CA1
nTPM: 94.4
2527 Male, age 74, both hemispheres 114.7
2082 Female, age 91, right hemisphere 104.3
2749 Male, age 80, left hemisphere 100.6
1873 Female, age 85, both hemispheres 91.0
2045 Male, age 76, both hemispheres 61.4
Hippocampus, CA2
nTPM: 100.0
1963 Male, age 80, left hemisphere 119.2
2113 Female, age 91, right hemisphere 115.9
2249 Male, age 74, both hemispheres 98.2
1940 Female, age 85, left hemisphere 97.7
2437 Female, age 94, left hemisphere 97.4
1892 Male, age 76, both hemispheres 71.4
Hippocampus, CA3
nTPM: 95.5
2861 Female, age 67, both hemispheres 119.0
2137 Male, age 80, left hemisphere 105.5
1891 Female, age 85, both hemispheres 92.8
2620 Female, age 94, left hemisphere 92.2
2436 Male, age 74, both hemispheres 89.6
1867 Male, age 76, both hemispheres 73.7
Parahippocampal cortex
nTPM: 95.5
2250 Female, age 67, right hemisphere 114.5
2245 Female, age 91, both hemispheres 111.8
2692 Male, age 74, both hemispheres 104.1
1990 Female, age 91, right hemisphere 102.3
2622 Female, age 67, right hemisphere 99.3
1933 Female, age 85, both hemispheres 94.9
2532 Female, age 72, left hemisphere 89.9
2018 Male, age 76, both hemispheres 84.0
1850 Male, age 80, both hemispheres 78.9
2693 Female, age 94, both hemispheres 75.7
Perirhinal gyrus
nTPM: 86.1
1847 Female, age 91, left hemisphere 94.6
2521 Female, age 94, right hemisphere 93.5
1794 Male, age 80, right hemisphere 85.0
1841 Female, age 85, right hemisphere 84.6
2848 Male, age 76, right hemisphere 73.0
Subiculum
nTPM: 101.1
2619 Male, age 74, both hemispheres 118.7
2729 Female, age 91, right hemisphere 118.6
1977 Female, age 85, both hemispheres 104.8
2042 Male, age 76, both hemispheres 94.6
1901 Male, age 80, both hemispheres 90.1
2438 Female, age 94, left hemisphere 80.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.5
Samples: 197

Max nTPM: 141.4
Min nTPM: 32.9
Std nTPM: 13.6
Median nTPM: 56.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 141.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 105.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 102.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 92.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 91.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 91.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 90.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 87.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 85.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 84.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 82.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.7
FF:10153-102I9 76 years, female 14.0
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 129.1
Pig sample Sample description nTPM
Subiculum
nTPM: 122.4
Samples: 4

Max nTPM: 150.0
Min nTPM: 105.2
Sample A Female 150.0
Sample B Female 113.7
Sample C Male 120.7
Sample D Male 105.2
Dorsal hippocampus
nTPM: 121.8
Samples: 4

Max nTPM: 148.5
Min nTPM: 93.0
Sample A Female 148.5
Sample B Female 125.0
Sample C Male 120.6
Sample D Male 93.0
Entorhinal cortex
nTPM: 120.0
Samples: 4

Max nTPM: 128.6
Min nTPM: 111.2
Sample A Female 122.0
Sample B Female 111.2
Sample C Male 128.6
Sample D Male 118.2
Ventral hippocampus
nTPM: 129.1
Samples: 4

Max nTPM: 156.8
Min nTPM: 97.3
Sample A Female 115.5
Sample B Female 97.3
Sample C Male 156.8
Sample D Male 146.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 27.2
Min nTPM: 22.1
Sample A Male 24.9
Sample B Male 27.2
Sample C Female 22.1
Sample D Female 26.6
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 23.7
Min nTPM: 20.8
Sample A Male 22.4
Sample B Male 23.7
Sample C Female 20.8
Sample D Female 21.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
72004448 Antisense, RP_050915_02_H02, Mouse strain C57BL/6J (56 days, male) 0.0

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