HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:12.5 nTPM
HPA Brain:57.8 nTPM
GTEx:12.5 nTPM
FANTOM5:49.5 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:20.2 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024000Antibody HPA024001Antibody HPA024467
Glial cells Not detectedLowNot detected
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 50.1
2621 Female, age 67, right hemisphere 54.6
2529 Female, age 94, left hemisphere 54.5
1911 Female, age 85, right hemisphere 48.7
1855 Male, age 76, left hemisphere 48.1
2148 Female, age 91, left hemisphere 47.9
1898 Male, age 80, left hemisphere 46.9
Dentate gyrus
nTPM: 49.8
2010 Male, age 76, both hemispheres 54.7
2531 Female, age 67, both hemispheres 53.9
2530 Female, age 94, left hemisphere 51.7
2246 Female, age 85, both hemispheres 51.3
1927 Female, age 91, both hemispheres 46.9
2528 Male, age 74, both hemispheres 39.9
Entorhinal gyrus
nTPM: 55.8
2686 Male, age 75, right hemisphere 61.2
1787 Male, age 76, left hemisphere 60.5
2613 Female, age 94, left hemisphere 60.2
1938 Female, age 85, left hemisphere 53.6
2764 Male, age 80, right hemisphere 52.4
2117 Female, age 91, right hemisphere 46.7
Hippocampus, CA1
nTPM: 48.5
2045 Male, age 76, both hemispheres 55.8
2527 Male, age 74, both hemispheres 50.4
1873 Female, age 85, both hemispheres 46.9
2749 Male, age 80, left hemisphere 45.6
2082 Female, age 91, right hemisphere 44.0
Hippocampus, CA2
nTPM: 49.1
1892 Male, age 76, both hemispheres 58.1
2437 Female, age 94, left hemisphere 52.9
1940 Female, age 85, left hemisphere 48.0
2113 Female, age 91, right hemisphere 47.8
1963 Male, age 80, left hemisphere 46.0
2249 Male, age 74, both hemispheres 41.9
Hippocampus, CA3
nTPM: 51.7
2861 Female, age 67, both hemispheres 59.8
2620 Female, age 94, left hemisphere 57.3
1867 Male, age 76, both hemispheres 53.2
1891 Female, age 85, both hemispheres 50.1
2137 Male, age 80, left hemisphere 46.7
2436 Male, age 74, both hemispheres 43.0
Parahippocampal cortex
nTPM: 57.8
2622 Female, age 67, right hemisphere 73.7
2245 Female, age 91, both hemispheres 62.3
2693 Female, age 94, both hemispheres 60.7
2532 Female, age 72, left hemisphere 57.4
2692 Male, age 74, both hemispheres 57.0
2018 Male, age 76, both hemispheres 56.5
1850 Male, age 80, both hemispheres 53.7
1933 Female, age 85, both hemispheres 53.0
2250 Female, age 67, right hemisphere 53.0
1990 Female, age 91, right hemisphere 50.7
Perirhinal gyrus
nTPM: 55.8
2848 Male, age 76, right hemisphere 60.6
2521 Female, age 94, right hemisphere 56.4
1841 Female, age 85, right hemisphere 55.1
1794 Male, age 80, right hemisphere 54.6
1847 Female, age 91, left hemisphere 52.3
Subiculum
nTPM: 50.8
2438 Female, age 94, left hemisphere 60.8
2619 Male, age 74, both hemispheres 58.1
1901 Male, age 80, both hemispheres 48.9
1977 Female, age 85, both hemispheres 46.8
2042 Male, age 76, both hemispheres 45.5
2729 Female, age 91, right hemisphere 44.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 20.3
Min nTPM: 8.0
Std nTPM: 2.0
Median nTPM: 12.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 20.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 20.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 19.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 18.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 18.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 18.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 17.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 17.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.5
FF:10153-102I9 76 years, female 64.8
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Subiculum
nTPM: 34.0
Samples: 4

Max nTPM: 39.3
Min nTPM: 30.4
Sample A Female 39.3
Sample B Female 30.4
Sample C Male 34.3
Sample D Male 32.0
Dorsal hippocampus
nTPM: 35.4
Samples: 4

Max nTPM: 41.6
Min nTPM: 28.0
Sample A Female 41.6
Sample B Female 35.7
Sample C Male 36.3
Sample D Male 28.0
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 38.8
Min nTPM: 30.2
Sample A Female 38.8
Sample B Female 30.2
Sample C Male 31.0
Sample D Male 35.4
Ventral hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 29.7
Sample A Female 35.3
Sample B Female 29.7
Sample C Male 39.4
Sample D Male 39.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 18.4
Sample A Male 19.7
Sample B Male 20.1
Sample C Female 18.4
Sample D Female 22.7
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 19.7
Min nTPM: 15.3
Sample A Male 15.3
Sample B Male 18.7
Sample C Female 19.7
Sample D Female 16.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
69014494 Antisense, RP_050310_01_C01, Mouse strain C57BL/6J (56 days, male) 6.1

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