HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:72.1 nTPM
GTEx:24.9 nTPM
FANTOM5:60.8 Scaled Tags Per Million
Pig:30.8 nTPM
Mouse:30.5 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.1
Sample id Sample description nTPM
Hippocampus
nTPM: 68.8
2148 Female, age 91, left hemisphere 75.2
1911 Female, age 85, right hemisphere 72.5
2621 Female, age 67, right hemisphere 71.0
1855 Male, age 76, left hemisphere 68.1
1898 Male, age 80, left hemisphere 67.2
2529 Female, age 94, left hemisphere 58.5
Dentate gyrus
nTPM: 72.1
2010 Male, age 76, both hemispheres 94.2
2530 Female, age 94, left hemisphere 80.7
1927 Female, age 91, both hemispheres 80.1
2528 Male, age 74, both hemispheres 62.9
2531 Female, age 67, both hemispheres 57.6
2246 Female, age 85, both hemispheres 56.7
Entorhinal gyrus
nTPM: 59.2
2117 Female, age 91, right hemisphere 83.1
2764 Male, age 80, right hemisphere 64.2
2613 Female, age 94, left hemisphere 59.6
1787 Male, age 76, left hemisphere 54.3
1938 Female, age 85, left hemisphere 53.0
2686 Male, age 75, right hemisphere 41.2
Hippocampus, CA1
nTPM: 70.4
2749 Male, age 80, left hemisphere 106.2
1873 Female, age 85, both hemispheres 75.9
2045 Male, age 76, both hemispheres 68.6
2527 Male, age 74, both hemispheres 60.9
2082 Female, age 91, right hemisphere 40.2
Hippocampus, CA2
nTPM: 69.2
1963 Male, age 80, left hemisphere 104.9
2249 Male, age 74, both hemispheres 73.8
1892 Male, age 76, both hemispheres 63.8
1940 Female, age 85, left hemisphere 61.3
2437 Female, age 94, left hemisphere 60.7
2113 Female, age 91, right hemisphere 50.5
Hippocampus, CA3
nTPM: 56.7
1891 Female, age 85, both hemispheres 69.8
2137 Male, age 80, left hemisphere 60.6
1867 Male, age 76, both hemispheres 59.6
2620 Female, age 94, left hemisphere 58.7
2436 Male, age 74, both hemispheres 47.0
2861 Female, age 67, both hemispheres 44.3
Parahippocampal cortex
nTPM: 50.3
2532 Female, age 72, left hemisphere 65.1
1990 Female, age 91, right hemisphere 61.9
1933 Female, age 85, both hemispheres 56.9
2692 Male, age 74, both hemispheres 53.0
2245 Female, age 91, both hemispheres 52.0
2018 Male, age 76, both hemispheres 49.4
1850 Male, age 80, both hemispheres 47.5
2693 Female, age 94, both hemispheres 42.9
2250 Female, age 67, right hemisphere 41.2
2622 Female, age 67, right hemisphere 32.9
Perirhinal gyrus
nTPM: 44.8
2848 Male, age 76, right hemisphere 47.7
1794 Male, age 80, right hemisphere 47.1
1847 Female, age 91, left hemisphere 45.9
2521 Female, age 94, right hemisphere 45.4
1841 Female, age 85, right hemisphere 38.0
Subiculum
nTPM: 72.1
2042 Male, age 76, both hemispheres 82.3
1901 Male, age 80, both hemispheres 79.6
1977 Female, age 85, both hemispheres 75.5
2438 Female, age 94, left hemisphere 74.9
2729 Female, age 91, right hemisphere 63.1
2619 Male, age 74, both hemispheres 57.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 64.3
Min nTPM: 8.5
Std nTPM: 9.9
Median nTPM: 24.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 64.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 61.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 45.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 45.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 44.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 44.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 43.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 43.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 42.4
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 41.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.8
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 56.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.8
Pig sample Sample description nTPM
Subiculum
nTPM: 27.9
Samples: 4

Max nTPM: 35.0
Min nTPM: 23.7
Sample A Female 35.0
Sample B Female 26.2
Sample C Male 26.8
Sample D Male 23.7
Dorsal hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 38.3
Min nTPM: 23.2
Sample A Female 38.3
Sample B Female 32.9
Sample C Male 28.8
Sample D Male 23.2
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 32.0
Min nTPM: 24.5
Sample A Female 31.6
Sample B Female 27.8
Sample C Male 32.0
Sample D Male 24.5
Ventral hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 22.7
Sample A Female 28.0
Sample B Female 22.7
Sample C Male 36.2
Sample D Male 32.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 24.2
Min nTPM: 19.2
Sample A Male 21.2
Sample B Male 19.2
Sample C Female 21.2
Sample D Female 24.2
Hippocampal formation
nTPM: 30.5
Samples: 4

Max nTPM: 38.5
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 31.3
Sample C Female 38.5
Sample D Female 28.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
385997 Antisense, RP_040625_01_G07, Mouse strain C57BL/6J (56 days, male) 3.1

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